(12 nodes) Cargo adaptor activity network (Cladophialophora immunda)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	PV07_08891	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (158 aa)
	PV07_08667	Uncharacterized protein. (255 aa)
	PV07_10825	AP-1 complex subunit gamma. (823 aa)
	PV07_03585	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (200 aa)
	PV07_09707	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (165 aa)
	PV07_04839	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (869 aa)
	PV07_06548	Uncharacterized protein. (794 aa)
	PV07_08819	Uncharacterized protein. (1059 aa)
	PV07_08668	Uncharacterized protein. (221 aa)
	PV07_05214	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (449 aa)
	PV07_06836	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (444 aa)
	PV07_09656	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (942 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_03585	PV07_04839	A0A0D2CLH8	A0A0D2CD36	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.999
PV07_04839	PV07_03585	A0A0D2CD36	A0A0D2CLH8	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.999
PV07_04839	PV07_10825	A0A0D2CD36	A0A0D2CNR0	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	AP-1 complex subunit gamma.	0.570
PV07_05214	PV07_06836	A0A0D1ZN70	A0A0D1ZGP0	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.666
PV07_05214	PV07_08667	A0A0D1ZN70	A0A0D1ZCR6	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.841
PV07_05214	PV07_08668	A0A0D1ZN70	A0A0D2AKN7	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.764
PV07_05214	PV07_08819	A0A0D1ZN70	A0A0D2AKY4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.728
PV07_05214	PV07_08891	A0A0D1ZN70	A0A0D1ZDA4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
PV07_05214	PV07_09707	A0A0D1ZN70	A0A0D2CKA5	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.682
PV07_05214	PV07_10825	A0A0D1ZN70	A0A0D2CNR0	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.999
PV07_06836	PV07_05214	A0A0D1ZGP0	A0A0D1ZN70	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.666
PV07_06836	PV07_08667	A0A0D1ZGP0	A0A0D1ZCR6	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.999
PV07_06836	PV07_08668	A0A0D1ZGP0	A0A0D2AKN7	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.986
PV07_06836	PV07_08819	A0A0D1ZGP0	A0A0D2AKY4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.784
PV07_06836	PV07_08891	A0A0D1ZGP0	A0A0D1ZDA4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.669
PV07_06836	PV07_09656	A0A0D1ZGP0	A0A0D1ZFI2	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.994
PV07_06836	PV07_09707	A0A0D1ZGP0	A0A0D2CKA5	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
PV07_06836	PV07_10825	A0A0D1ZGP0	A0A0D2CNR0	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.967
PV07_08667	PV07_05214	A0A0D1ZCR6	A0A0D1ZN70	Uncharacterized protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.841
PV07_08667	PV07_06836	A0A0D1ZCR6	A0A0D1ZGP0	Uncharacterized protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.999