STRINGSTRING
PV07_10833 PV07_10833 PV07_08463 PV07_08463 PV07_06675 PV07_06675 PV07_08180 PV07_08180 PV07_03725 PV07_03725 PV07_12481 PV07_12481 PV07_11988 PV07_11988 PV07_09685 PV07_09685 PV07_11476 PV07_11476 NAT10 NAT10 PV07_08486 PV07_08486 PV07_10742 PV07_10742 PV07_10831 PV07_10831 PV07_08846 PV07_08846 PV07_07733 PV07_07733 PV07_07995 PV07_07995 PV07_05088 PV07_05088 PV07_05793 PV07_05793 PV07_02437 PV07_02437 PV07_03554 PV07_03554 PV07_04066 PV07_04066 PV07_03438 PV07_03438 PV07_03473 PV07_03473 PV07_04438 PV07_04438 PV07_04566 PV07_04566 PV07_05405 PV07_05405 PV07_02660 PV07_02660 PV07_03726 PV07_03726 PV07_00455 PV07_00455 PV07_00755 PV07_00755 PV07_01448 PV07_01448 PV07_12321 PV07_12321 PV07_07002 PV07_07002 PV07_04640 PV07_04640 PV07_05339 PV07_05339 PV07_03970 PV07_03970 PV07_01297 PV07_01297 PV07_10110 PV07_10110
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV07_10833Uncharacterized protein; Belongs to the DEAD box helicase family. (525 aa)
PV07_08463Uncharacterized protein. (548 aa)
PV07_06675Uncharacterized protein. (307 aa)
PV07_08180Uncharacterized protein. (394 aa)
PV07_03725Zn(2)-C6 fungal-type domain-containing protein. (755 aa)
PV07_12481CBF domain-containing protein. (293 aa)
PV07_11988RNA helicase. (635 aa)
PV07_09685Fungal_trans domain-containing protein. (644 aa)
PV07_11476Uncharacterized protein. (906 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1110 aa)
PV07_0848660S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (314 aa)
PV07_10742RRM domain-containing protein. (309 aa)
PV07_10831Uncharacterized protein. (280 aa)
PV07_08846Fungal_trans domain-containing protein. (716 aa)
PV07_07733RNA helicase. (626 aa)
PV07_07995U3 small nucleolar RNA-associated protein 22. (1150 aa)
PV07_05088RING-type domain-containing protein. (703 aa)
PV07_05793WD_REPEATS_REGION domain-containing protein. (601 aa)
PV07_02437Uncharacterized protein. (304 aa)
PV07_03554U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (760 aa)
PV07_04066WD_REPEATS_REGION domain-containing protein. (1020 aa)
PV07_03438RRM domain-containing protein. (667 aa)
PV07_03473Zn(2)-C6 fungal-type domain-containing protein. (716 aa)
PV07_04438Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (533 aa)
PV07_0456618S rRNA biogenesis protein RCL1. (407 aa)
PV07_05405NUC153 domain-containing protein. (725 aa)
PV07_02660Uncharacterized protein. (707 aa)
PV07_03726Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (487 aa)
PV07_00455Zn(2)-C6 fungal-type domain-containing protein. (704 aa)
PV07_00755CBF domain-containing protein. (1066 aa)
PV07_01448Uncharacterized protein. (683 aa)
PV07_12321Utp12 domain-containing protein. (962 aa)
PV07_0700240S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (146 aa)
PV07_04640Brix domain-containing protein. (296 aa)
PV07_05339Zn(2)-C6 fungal-type domain-containing protein. (741 aa)
PV07_03970WD_REPEATS_REGION domain-containing protein. (967 aa)
PV07_01297F-box domain-containing protein. (1228 aa)
PV07_10110Zn(2)-C6 fungal-type domain-containing protein. (741 aa)
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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