19 items (Cladophialophora immunda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_01664	Uncharacterized protein. (1126 aa)
	PV07_01121	RNA helicase. (877 aa)
	PV07_05873	PINc domain-containing protein. (194 aa)
	PV07_09123	WD_REPEATS_REGION domain-containing protein. (559 aa)
	PV07_08876	DRIM domain-containing protein. (2599 aa)
	PV07_08277	Uncharacterized protein. (436 aa)
	PV07_09264	Uncharacterized protein. (937 aa)
	PV07_09803	WD_REPEATS_REGION domain-containing protein. (443 aa)
	PV07_01305	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (287 aa)
	PV07_01037	Uncharacterized protein. (891 aa)
	PV07_04586	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
	PV07_08463	Uncharacterized protein. (548 aa)
	PV07_07186	Uncharacterized protein. (1257 aa)
	PV07_07044	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (744 aa)
	PV07_05940	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	PV07_00407	Uncharacterized protein. (1797 aa)
	PV07_09362	WD_REPEATS_REGION domain-containing protein. (603 aa)
	PV07_00887	Uncharacterized protein. (318 aa)
	PV07_01358	Sas10 domain-containing protein. (587 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00407	PV07_00887	A0A0D2CQV0	A0A0D2CSD4	Uncharacterized protein.	Uncharacterized protein.	0.826
PV07_00407	PV07_01037	A0A0D2CQV0	A0A0D2DEV6	Uncharacterized protein.	Uncharacterized protein.	0.663
PV07_00407	PV07_01121	A0A0D2CQV0	A0A0D2CWU4	Uncharacterized protein.	RNA helicase.	0.961
PV07_00407	PV07_01305	A0A0D2CQV0	A0A0D2DFT3	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
PV07_00407	PV07_01358	A0A0D2CQV0	A0A0D2CTV0	Uncharacterized protein.	Sas10 domain-containing protein.	0.999
PV07_00407	PV07_01664	A0A0D2CQV0	A0A0D2CUY5	Uncharacterized protein.	Uncharacterized protein.	0.999
PV07_00407	PV07_04586	A0A0D2CQV0	A0A0D1ZYC8	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
PV07_00407	PV07_05873	A0A0D2CQV0	A0A0D2D318	Uncharacterized protein.	PINc domain-containing protein.	0.983
PV07_00407	PV07_05940	A0A0D2CQV0	A0A0D2CGC8	Uncharacterized protein.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
PV07_00407	PV07_07044	A0A0D2CQV0	A0A0D2C827	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.995
PV07_00407	PV07_07186	A0A0D2CQV0	A0A0D2AQU7	Uncharacterized protein.	Uncharacterized protein.	0.994
PV07_00407	PV07_08277	A0A0D2CQV0	A0A0D1ZKX5	Uncharacterized protein.	Uncharacterized protein.	0.961
PV07_00407	PV07_08463	A0A0D2CQV0	A0A0D2AK15	Uncharacterized protein.	Uncharacterized protein.	0.991
PV07_00407	PV07_08876	A0A0D2CQV0	A0A0D1ZD87	Uncharacterized protein.	DRIM domain-containing protein.	0.999
PV07_00407	PV07_09123	A0A0D2CQV0	A0A0D2C697	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
PV07_00407	PV07_09264	A0A0D2CQV0	A0A0D1ZEJ2	Uncharacterized protein.	Uncharacterized protein.	0.997
PV07_00407	PV07_09362	A0A0D2CQV0	A0A0D2CRL0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.991
PV07_00407	PV07_09803	A0A0D2CQV0	A0A0D2BY98	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
PV07_00887	PV07_00407	A0A0D2CSD4	A0A0D2CQV0	Uncharacterized protein.	Uncharacterized protein.	0.826
PV07_00887	PV07_01121	A0A0D2CSD4	A0A0D2CWU4	Uncharacterized protein.	RNA helicase.	0.799