STRINGSTRING
PV07_08034 PV07_08034 PV07_02010 PV07_02010 PV07_00169 PV07_00169 PV07_04515 PV07_04515 PV07_06359 PV07_06359 PV07_00291 PV07_00291 PV07_07639 PV07_07639 PV07_02140 PV07_02140 PV07_05087 PV07_05087 PV07_05516 PV07_05516 PV07_05556 PV07_05556 PV07_03222 PV07_03222 PV07_00563 PV07_00563 PV07_02174 PV07_02174 PV07_01128 PV07_01128 PV07_05559 PV07_05559 PV07_07076 PV07_07076 PV07_06719 PV07_06719 PV07_08462 PV07_08462 PV07_11065 PV07_11065 PV07_12466 PV07_12466 PV07_11621 PV07_11621 PV07_12084 PV07_12084 PV07_09749 PV07_09749 PV07_07094 PV07_07094 PV07_11037 PV07_11037 PV07_07893 PV07_07893 PV07_08001 PV07_08001 PV07_11429 PV07_11429 PAN2 PAN2 PV07_02880 PV07_02880 PV07_06256 PV07_06256 PV07_10087 PV07_10087 PV07_02079 PV07_02079 PV07_10429 PV07_10429 PV07_12549 PV07_12549 PV07_11910 PV07_11910 PV07_09296 PV07_09296 PV07_07730 PV07_07730 PV07_06879 PV07_06879 PV07_01285 PV07_01285
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV07_08034Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. (673 aa)
PV07_02010Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (1141 aa)
PV07_00169TGc domain-containing protein. (701 aa)
PV07_04515Uncharacterized protein. (1135 aa)
PV07_06359ULP_PROTEASE domain-containing protein. (271 aa)
PV07_00291USP domain-containing protein; Belongs to the peptidase C19 family. (645 aa)
PV07_07639Uncharacterized protein. (356 aa)
PV07_02140Ubiquitin carboxyl-terminal hydrolase. (238 aa)
PV07_05087Ubiquitin carboxyl-terminal hydrolase. (902 aa)
PV07_05516SH3 domain-containing protein. (1171 aa)
PV07_05556Uncharacterized protein; Belongs to the peptidase C19 family. (1130 aa)
PV07_03222Uncharacterized protein. (554 aa)
PV07_00563OTU domain-containing protein. (413 aa)
PV07_02174RING-type domain-containing protein. (1356 aa)
PV07_01128Ubiquitin carboxyl-terminal hydrolase. (246 aa)
PV07_05559ULP_PROTEASE domain-containing protein. (1324 aa)
PV07_07076USP domain-containing protein. (818 aa)
PV07_06719Ubiquitin carboxyl-terminal hydrolase. (581 aa)
PV07_08462Uncharacterized protein. (1067 aa)
PV07_11065USP domain-containing protein; Belongs to the peptidase C19 family. (1370 aa)
PV07_12466Uncharacterized protein. (1102 aa)
PV07_11621Ubiquitin carboxyl-terminal hydrolase. (579 aa)
PV07_12084Uncharacterized protein. (337 aa)
PV07_09749USP domain-containing protein; Belongs to the peptidase C19 family. (1186 aa)
PV07_07094Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (863 aa)
PV07_11037Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (878 aa)
PV07_07893USP domain-containing protein; Belongs to the peptidase C19 family. (605 aa)
PV07_08001UCH_1 domain-containing protein. (343 aa)
PV07_11429Ubiquitin carboxyl-terminal hydrolase. (721 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1189 aa)
PV07_02880Ubiquitin carboxyl-terminal hydrolase. (305 aa)
PV07_06256TGc domain-containing protein. (435 aa)
PV07_10087Ubiquitin carboxyl-terminal hydrolase. (794 aa)
PV07_02079Uncharacterized protein; Belongs to the peptidase C19 family. (1597 aa)
PV07_10429USP domain-containing protein; Belongs to the peptidase C19 family. (2543 aa)
PV07_12549OTU domain-containing protein. (194 aa)
PV07_11910Cysteine proteinase 1, mitochondrial; Has aminopeptidase activity, shortening substrate peptides sequentially by 1 amino acid. Has bleomycin hydrolase activity, which can protect the cell from the toxic effects of bleomycin. Has homocysteine-thiolactonase activity, protecting the cell against homocysteine toxicity. (518 aa)
PV07_09296Uncharacterized protein. (584 aa)
PV07_07730OTU domain-containing protein. (303 aa)
PV07_06879ULP_PROTEASE domain-containing protein. (882 aa)
PV07_01285Ubiquitin carboxyl-terminal hydrolase. (326 aa)
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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