STRINGSTRING
PV07_08541 PV07_08541 PV07_10917 PV07_10917 PV07_07442 PV07_07442 PV07_09812 PV07_09812 PV07_12414 PV07_12414 PV07_02133 PV07_02133 PV07_05691 PV07_05691 PV07_03204 PV07_03204 PV07_02914 PV07_02914 PV07_03033 PV07_03033 PV07_08539 PV07_08539 PV07_04512 PV07_04512 PV07_01000 PV07_01000 PV07_01601 PV07_01601 PV07_10855 PV07_10855
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV07_08541Vezatin domain-containing protein. (591 aa)
PV07_10917DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (910 aa)
PV07_07442Uncharacterized protein. (244 aa)
PV07_09812DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1675 aa)
PV07_12414Uncharacterized protein. (682 aa)
PV07_02133NUP214 domain-containing protein. (1489 aa)
PV07_05691Uncharacterized protein. (287 aa)
PV07_03204Ubiquitin-like domain-containing protein. (103 aa)
PV07_02914WD_REPEATS_REGION domain-containing protein. (1263 aa)
PV07_03033SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
PV07_08539Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
PV07_04512WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (483 aa)
PV07_01000Uncharacterized protein. (256 aa)
PV07_01601RanBD1 domain-containing protein. (1477 aa)
PV07_10855Uncharacterized protein. (382 aa)
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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