(50 nodes) Branched-chain amino acid catabolism network (Cladophialophora immunda)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_10632	Protein-serine/threonine kinase. (476 aa)
	PV07_07012	Uncharacterized protein. (290 aa)
	PV07_08369	Uncharacterized protein. (301 aa)
	PV07_06374	Branched-chain amino acid aminotransferase. (379 aa)
	PV07_00544	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)
	PV07_00823	Uncharacterized protein. (278 aa)
	PV07_00922	Uncharacterized protein. (315 aa)
	PV07_01254	Uncharacterized protein. (325 aa)
	PV07_02361	Methylmalonate-semialdehyde dehydrogenase (Acylating). (568 aa)
	PV07_12405	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (307 aa)
	PV07_11949	Uncharacterized protein. (304 aa)
	PV07_11977	Uncharacterized protein. (341 aa)
	PV07_09689	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
	PV07_10590	Uncharacterized protein. (314 aa)
	PV07_09200	2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). (457 aa)
	PV07_09287	Uncharacterized protein. (540 aa)
	PV07_00175	Uncharacterized protein. (274 aa)
	PV07_00242	Uncharacterized protein. (320 aa)
	PV07_01505	Uncharacterized protein. (259 aa)
	PV07_01802	Uncharacterized protein. (278 aa)
	PV07_11906	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (276 aa)
	PV07_11321	Methylmalonate-semialdehyde dehydrogenase (Acylating). (557 aa)
	PV07_11581	Uncharacterized protein. (272 aa)
	PV07_08841	Uncharacterized protein. (96 aa)
	PV07_06708	Uncharacterized protein. (430 aa)
	PV07_07323	Uncharacterized protein. (572 aa)
	PV07_04662	Uncharacterized protein. (340 aa)
	PV07_11658	Uncharacterized protein. (316 aa)
	PV07_03142	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (504 aa)
	PV07_03183	Uncharacterized protein. (334 aa)
	PV07_03515	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
	PV07_08385	Uncharacterized protein. (363 aa)
	PV07_03343	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (456 aa)
	PV07_08840	Uncharacterized protein. (192 aa)
	PV07_00769	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (340 aa)
	PV07_04495	3-hydroxyisobutyrate dehydrogenase. (342 aa)
	PV07_01420	Transket_pyr domain-containing protein. (392 aa)
	PV07_01991	Transket_pyr domain-containing protein. (390 aa)
	PV07_07577	Uncharacterized protein. (291 aa)
	PV07_01422	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (495 aa)
	PV07_01638	Uncharacterized protein. (288 aa)
	PV07_05014	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (284 aa)
	PV07_05557	Protein-serine/threonine kinase. (439 aa)
	PV07_06177	Uncharacterized protein. (330 aa)
	PV07_02557	Uncharacterized protein. (279 aa)
	PV07_04104	Uncharacterized protein. (254 aa)
	PV07_04579	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (291 aa)
	PV07_01072	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (522 aa)
	PV07_01242	Uncharacterized protein. (318 aa)
	PV07_01421	2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). (447 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00175	PV07_00544	A0A0D2B6S8	A0A0D1ZZW9	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.524
PV07_00175	PV07_01072	A0A0D2B6S8	A0A0D2DF00	Uncharacterized protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.522
PV07_00175	PV07_01254	A0A0D2B6S8	A0A0D2A2D4	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_01802	A0A0D2B6S8	A0A0D2BC07	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_02361	A0A0D2B6S8	A0A0D2A5M7	Uncharacterized protein.	Methylmalonate-semialdehyde dehydrogenase (Acylating).	0.413
PV07_00175	PV07_02557	A0A0D2B6S8	A0A0D2D5A4	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_04104	A0A0D2B6S8	A0A0D2DA65	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_04579	A0A0D2B6S8	A0A0D2DBK8	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.524
PV07_00175	PV07_05014	A0A0D2B6S8	A0A0D2D064	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.524
PV07_00175	PV07_07012	A0A0D2B6S8	A0A0D1ZH29	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_08840	A0A0D2B6S8	A0A0D2CQ03	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_08841	A0A0D2B6S8	A0A0D2C5C7	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_09689	A0A0D2B6S8	A0A0D2AGD4	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.524
PV07_00175	PV07_11321	A0A0D2B6S8	A0A0D2BXQ5	Uncharacterized protein.	Methylmalonate-semialdehyde dehydrogenase (Acylating).	0.413
PV07_00175	PV07_11581	A0A0D2B6S8	A0A0D2BYG9	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_11658	A0A0D2B6S8	A0A0D2CIS7	Uncharacterized protein.	Uncharacterized protein.	0.524
PV07_00175	PV07_11906	A0A0D2B6S8	A0A0D2BX78	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.524
PV07_00242	PV07_00544	A0A0D2B701	A0A0D1ZZW9	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.767
PV07_00242	PV07_00823	A0A0D2B701	A0A0D2A0W3	Uncharacterized protein.	Uncharacterized protein.	0.645
PV07_00242	PV07_01072	A0A0D2B701	A0A0D2DF00	Uncharacterized protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.667