42 items (Cladophialophora immunda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_07054	RING-box protein 1A. (124 aa)
	PV07_11429	Ubiquitin carboxyl-terminal hydrolase. (721 aa)
	PV07_05776	Uncharacterized protein. (444 aa)
	PV07_02344	UmuC domain-containing protein. (590 aa)
	PV07_01202	CPSF_A domain-containing protein. (1197 aa)
	PV07_00060	DNA repair protein rad18. (487 aa)
	PV07_04242	Uncharacterized protein. (761 aa)
	PV07_05148	AAA domain-containing protein. (809 aa)
	PV07_02073	AAA domain-containing protein. (961 aa)
	PV07_07652	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV07_00371	Uncharacterized protein. (509 aa)
	PV07_00182	Uncharacterized protein. (232 aa)
	PV07_06707	UmuC domain-containing protein. (655 aa)
	PV07_01157	WD_REPEATS_REGION domain-containing protein. (1066 aa)
	PV07_01036	ATPase_AAA_core domain-containing protein. (1107 aa)
	PV07_00850	HORMA domain-containing protein. (315 aa)
	PV07_00498	Uncharacterized protein. (131 aa)
	PV07_03724	BZIP domain-containing protein. (129 aa)
	PV07_04217	Uncharacterized protein; Belongs to the AAA ATPase family. (695 aa)
	PV07_10514	CCHC-type domain-containing protein. (318 aa)
	PV07_03170	AAA domain-containing protein. (733 aa)
	PV07_03153	Uncharacterized protein. (716 aa)
	PV07_05910	UmuC domain-containing protein. (692 aa)
	PV07_04152	SnoaL-like domain-containing protein. (160 aa)
	PV07_02079	Uncharacterized protein; Belongs to the peptidase C19 family. (1597 aa)
	PV07_11588	Uncharacterized protein. (559 aa)
	PV07_05087	Ubiquitin carboxyl-terminal hydrolase. (902 aa)
	PV07_05765	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1180 aa)
	PV07_02920	Uncharacterized protein. (148 aa)
	PV07_00209	CBFD_NFYB_HMF domain-containing protein. (196 aa)
	PV07_00406	Uncharacterized protein. (706 aa)
	PV07_00497	CULLIN_2 domain-containing protein; Belongs to the cullin family. (903 aa)
	PV07_10101	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (606 aa)
	PV07_11911	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	PV07_12466	Uncharacterized protein. (1102 aa)
	PV07_12634	BZIP domain-containing protein. (189 aa)
	PV07_07076	USP domain-containing protein. (818 aa)
	PV07_10133	Uncharacterized protein. (810 aa)
	PV07_12548	BZIP domain-containing protein. (202 aa)
	PV07_08616	Uncharacterized protein. (383 aa)
	PV07_10439	Zds_C domain-containing protein. (924 aa)
	PV07_09014	DNA polymerase. (1699 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00060	PV07_00182	A0A0D2DBT8	A0A0D2CTR5	DNA repair protein rad18.	Uncharacterized protein.	0.563
PV07_00060	PV07_00371	A0A0D2DBT8	A0A0D2CUL0	DNA repair protein rad18.	Uncharacterized protein.	0.740
PV07_00060	PV07_00406	A0A0D2DBT8	A0A0D2B7M2	DNA repair protein rad18.	Uncharacterized protein.	0.759
PV07_00060	PV07_00497	A0A0D2DBT8	A0A0D2B7T4	DNA repair protein rad18.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.711
PV07_00060	PV07_00850	A0A0D2DBT8	A0A0D2CS99	DNA repair protein rad18.	HORMA domain-containing protein.	0.504
PV07_00060	PV07_01036	A0A0D2DBT8	A0A0D2CSU0	DNA repair protein rad18.	ATPase_AAA_core domain-containing protein.	0.842
PV07_00060	PV07_01157	A0A0D2DBT8	A0A0D2CT88	DNA repair protein rad18.	WD_REPEATS_REGION domain-containing protein.	0.738
PV07_00060	PV07_01202	A0A0D2DBT8	A0A0D2DFE9	DNA repair protein rad18.	CPSF_A domain-containing protein.	0.685
PV07_00060	PV07_02344	A0A0D2DBT8	A0A0D2DIY8	DNA repair protein rad18.	UmuC domain-containing protein.	0.755
PV07_00060	PV07_03724	A0A0D2DBT8	A0A0D2CQC1	DNA repair protein rad18.	BZIP domain-containing protein.	0.850
PV07_00060	PV07_05765	A0A0D2DBT8	A0A0D2AXI1	DNA repair protein rad18.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.765
PV07_00060	PV07_05910	A0A0D2DBT8	A0A0D1ZQ57	DNA repair protein rad18.	UmuC domain-containing protein.	0.634
PV07_00060	PV07_06707	A0A0D2DBT8	A0A0D2CTI4	DNA repair protein rad18.	UmuC domain-containing protein.	0.893
PV07_00060	PV07_07054	A0A0D2DBT8	A0A0D2C838	DNA repair protein rad18.	RING-box protein 1A.	0.784
PV07_00060	PV07_07652	A0A0D2DBT8	A0A0D2CWF6	DNA repair protein rad18.	Ubiquitin-40S ribosomal protein S27a.	0.850
PV07_00060	PV07_09014	A0A0D2DBT8	A0A0D2C3T6	DNA repair protein rad18.	DNA polymerase.	0.921
PV07_00060	PV07_10101	A0A0D2DBT8	A0A0D2BZ37	DNA repair protein rad18.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.802
PV07_00060	PV07_11429	A0A0D2DBT8	A0A0D2CI07	DNA repair protein rad18.	Ubiquitin carboxyl-terminal hydrolase.	0.725
PV07_00060	PV07_11911	A0A0D2DBT8	A0A0D2BX81	DNA repair protein rad18.	Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.	0.991
PV07_00060	PV07_12548	A0A0D2DBT8	A0A0D1Z366	DNA repair protein rad18.	BZIP domain-containing protein.	0.850