28 items (Cladophialophora immunda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_00509	ANK_REP_REGION domain-containing protein. (238 aa)
	PV07_01859	LIM zinc-binding domain-containing protein. (578 aa)
	PV07_01925	Aldolase_II domain-containing protein. (303 aa)
	PV07_01786	Uncharacterized protein. (885 aa)
	PV07_01186	Uncharacterized protein. (491 aa)
	PV07_03737	GTP-binding protein rhoA. (193 aa)
	PV07_04942	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (273 aa)
	PV07_06848	Uncharacterized protein. (741 aa)
	PV07_07134	Non-specific serine/threonine protein kinase. (889 aa)
	PV07_12014	GTP-binding protein rho2. (202 aa)
	PV07_10289	Aldolase_II domain-containing protein. (285 aa)
	PV07_09837	Aldolase_II domain-containing protein. (303 aa)
	PV07_11780	Uncharacterized protein. (209 aa)
	PV07_11064	ANK_REP_REGION domain-containing protein. (609 aa)
	PV07_00443	Aldolase_II domain-containing protein. (314 aa)
	PV07_03128	Uncharacterized protein. (203 aa)
	PV07_08729	Protein kinase domain-containing protein. (206 aa)
	PV07_10141	Non-specific serine/threonine protein kinase. (872 aa)
	PV07_11656	Zn(2)-C6 fungal-type domain-containing protein. (455 aa)
	PV07_01459	Uncharacterized protein. (567 aa)
	PV07_04126	Aldolase_II domain-containing protein. (299 aa)
	PV07_06174	Zn(2)-C6 fungal-type domain-containing protein. (637 aa)
	PV07_07300	Uncharacterized protein. (668 aa)
	PV07_07163	Uncharacterized protein. (100 aa)
	PV07_06881	GTP-binding protein rhoC. (275 aa)
	PV07_06634	Aldolase_II domain-containing protein. (285 aa)
	PV07_09422	Uncharacterized protein. (1340 aa)
	PV07_08489	Uncharacterized protein. (1218 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00509	PV07_01859	A0A0D2CUX0	A0A0D2DHB1	ANK_REP_REGION domain-containing protein.	LIM zinc-binding domain-containing protein.	0.444
PV07_00509	PV07_08489	A0A0D2CUX0	A0A0D1ZC17	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.444
PV07_01459	PV07_03128	A0A0D2A339	A0A0D2B1J2	Uncharacterized protein.	Uncharacterized protein.	0.617
PV07_01459	PV07_03737	A0A0D2A339	A0A0D2CLS3	Uncharacterized protein.	GTP-binding protein rhoA.	0.617
PV07_01459	PV07_06881	A0A0D2A339	A0A0D1ZGR6	Uncharacterized protein.	GTP-binding protein rhoC.	0.617
PV07_01459	PV07_11064	A0A0D2A339	A0A0D2BWQ4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.617
PV07_01459	PV07_11780	A0A0D2A339	A0A0D2BWY6	Uncharacterized protein.	Uncharacterized protein.	0.617
PV07_01459	PV07_12014	A0A0D2A339	A0A0D2BZV6	Uncharacterized protein.	GTP-binding protein rho2.	0.617
PV07_01786	PV07_01859	A0A0D2CVD4	A0A0D2DHB1	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.997
PV07_01786	PV07_03128	A0A0D2CVD4	A0A0D2B1J2	Uncharacterized protein.	Uncharacterized protein.	0.831
PV07_01786	PV07_03737	A0A0D2CVD4	A0A0D2CLS3	Uncharacterized protein.	GTP-binding protein rhoA.	0.772
PV07_01786	PV07_06881	A0A0D2CVD4	A0A0D1ZGR6	Uncharacterized protein.	GTP-binding protein rhoC.	0.831
PV07_01786	PV07_07134	A0A0D2CVD4	A0A0D2C8G7	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.722
PV07_01786	PV07_08489	A0A0D2CVD4	A0A0D1ZC17	Uncharacterized protein.	Uncharacterized protein.	0.997
PV07_01786	PV07_08729	A0A0D2CVD4	A0A0D2AKS1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.722
PV07_01786	PV07_09422	A0A0D2CVD4	A0A0D1ZEW5	Uncharacterized protein.	Uncharacterized protein.	0.751
PV07_01786	PV07_10141	A0A0D2CVD4	A0A0D2AHQ9	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.722
PV07_01786	PV07_11064	A0A0D2CVD4	A0A0D2BWQ4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.723
PV07_01786	PV07_11780	A0A0D2CVD4	A0A0D2BWY6	Uncharacterized protein.	Uncharacterized protein.	0.753
PV07_01786	PV07_12014	A0A0D2CVD4	A0A0D2BZV6	Uncharacterized protein.	GTP-binding protein rho2.	0.808