STRINGSTRING
PV07_08186 PV07_08186 PV07_07078 PV07_07078 PV07_06907 PV07_06907 PV07_07456 PV07_07456 PV07_06698 PV07_06698 PV07_06476 PV07_06476 PV07_06576 PV07_06576 PV07_08846 PV07_08846 PV07_09366 PV07_09366 PV07_10428 PV07_10428 PV07_11772 PV07_11772 NAT10 NAT10 PV07_09685 PV07_09685 PV07_12555 PV07_12555 PV07_01754 PV07_01754 PV07_00849 PV07_00849 PV07_00312 PV07_00312 PV07_04604 PV07_04604 PV07_03725 PV07_03725 PV07_03216 PV07_03216 PV07_02526 PV07_02526 PV07_05712 PV07_05712 PV07_05614 PV07_05614 PV07_08180 PV07_08180 PV07_07727 PV07_07727 PV07_07173 PV07_07173 PV07_08555 PV07_08555 PV07_08546 PV07_08546 PV07_10110 PV07_10110 PV07_09727 PV07_09727 PV07_11980 PV07_11980 PV07_11671 PV07_11671 PV07_11407 PV07_11407 PV07_11127 PV07_11127 PV07_12322 PV07_12322 PV07_01542 PV07_01542 PV07_00711 PV07_00711 PV07_00600 PV07_00600 PV07_00501 PV07_00501 PV07_00332 PV07_00332 PV07_04603 PV07_04603 PV07_03970 PV07_03970 PV07_03255 PV07_03255 PV07_06141 PV07_06141 PV07_05339 PV07_05339 PV07_04640 PV07_04640 PV07_08277 PV07_08277 PV07_07210 PV07_07210 PV07_09264 PV07_09264 PV07_08747 PV07_08747 PV07_08443 PV07_08443 PV07_10534 PV07_10534 PV07_10459 PV07_10459 PV07_11670 PV07_11670 PV07_12321 PV07_12321 PV07_01954 PV07_01954 PV07_00719 PV07_00719 PV07_00455 PV07_00455 PV07_03726 PV07_03726 PV07_03586 PV07_03586 PV07_03482 PV07_03482 PV07_02476 PV07_02476 PV07_06255 PV07_06255 PV07_05873 PV07_05873 PV07_01771 PV07_01771 PV07_01488 PV07_01488 PV07_08066 PV07_08066 PV07_01256 PV07_01256 PV07_02071 PV07_02071 PV07_07327 PV07_07327 PV07_01664 PV07_01664 PV07_01593 PV07_01593 PV07_06898 PV07_06898 PV07_04566 PV07_04566 PV07_01116 PV07_01116 PV07_01071 PV07_01071 PV07_04064 PV07_04064 PV07_09202 PV07_09202 PV07_00449 PV07_00449 PV07_03473 PV07_03473 PV07_03302 PV07_03302 PV07_03242 PV07_03242 PV07_03214 PV07_03214 PV07_04217 PV07_04217 PV07_04066 PV07_04066 PV07_03897 PV07_03897 PV07_02798 PV07_02798 PV07_03669 PV07_03669 PV07_03554 PV07_03554 PV07_11888 PV07_11888 PV07_11762 PV07_11762 PV07_02437 PV07_02437 PV07_05505 PV07_05505 TIF6 TIF6 PV07_05188 PV07_05188 PV07_05793 PV07_05793 PV07_12301 PV07_12301 PV07_05615 PV07_05615 PV07_05522 PV07_05522 PV07_07995 PV07_07995
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV07_08186H/ACA ribonucleoprotein complex subunit 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (401 aa)
PV07_07078CP-type G domain-containing protein. (735 aa)
PV07_06907Uncharacterized protein. (460 aa)
PV07_07456WD_REPEATS_REGION domain-containing protein. (533 aa)
PV07_06698Uncharacterized protein. (137 aa)
PV07_06476GAR domain-containing protein. (1068 aa)
PV07_06576Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (193 aa)
PV07_08846Fungal_trans domain-containing protein. (716 aa)
PV07_09366WD_REPEATS_REGION domain-containing protein. (998 aa)
PV07_10428Uncharacterized protein. (246 aa)
PV07_11772Exonuclease domain-containing protein. (246 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1110 aa)
PV07_09685Fungal_trans domain-containing protein. (644 aa)
PV07_12555Uncharacterized protein. (393 aa)
PV07_01754Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (387 aa)
PV07_00849RNase III domain-containing protein. (180 aa)
PV07_00312DUF4604 domain-containing protein. (181 aa)
PV07_04604Nop domain-containing protein. (519 aa)
PV07_03725Zn(2)-C6 fungal-type domain-containing protein. (755 aa)
PV07_03216Uncharacterized protein. (440 aa)
PV07_02526BP28CT domain-containing protein. (1904 aa)
PV07_05712Uncharacterized protein. (263 aa)
PV07_0561420S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (448 aa)
PV07_08180Uncharacterized protein. (394 aa)
PV07_07727Uncharacterized protein. (1188 aa)
PV07_07173Centromere/microtubule-binding protein cbf5. (503 aa)
PV07_08555Ribosomal_L7Ae domain-containing protein. (301 aa)
PV07_08546Exonuclease domain-containing protein. (642 aa)
PV07_10110Zn(2)-C6 fungal-type domain-containing protein. (741 aa)
PV07_09727RNase III domain-containing protein. (297 aa)
PV07_119805'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1031 aa)
PV07_11671Uncharacterized protein. (360 aa)
PV07_11407Exonuclease domain-containing protein. (746 aa)
PV07_11127TAP-C domain-containing protein. (447 aa)
PV07_12322Uncharacterized protein. (972 aa)
PV07_01542CP-type G domain-containing protein. (554 aa)
PV07_00711Spindle pole body component. (768 aa)
PV07_00600tRNA pseudouridine(55) synthase. (435 aa)
PV07_00501RIO domain-containing protein. (383 aa)
PV07_00332Tr-type G domain-containing protein. (1109 aa)
PV07_04603Uncharacterized protein. (225 aa)
PV07_03970WD_REPEATS_REGION domain-containing protein. (967 aa)
PV07_03255Casein kinase I isoform delta; Belongs to the protein kinase superfamily. (388 aa)
PV07_06141Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (580 aa)
PV07_05339Zn(2)-C6 fungal-type domain-containing protein. (741 aa)
PV07_04640Brix domain-containing protein. (296 aa)
PV07_08277Uncharacterized protein. (436 aa)
PV07_07210RAI1 domain-containing protein. (392 aa)
PV07_09264Uncharacterized protein. (937 aa)
PV07_08747Uncharacterized protein. (141 aa)
PV07_08443Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (612 aa)
PV07_10534Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (350 aa)
PV07_10459Uncharacterized protein. (337 aa)
PV07_11670Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (337 aa)
PV07_12321Utp12 domain-containing protein. (962 aa)
PV07_01954Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4877 aa)
PV07_00719Uncharacterized protein. (254 aa)
PV07_00455Zn(2)-C6 fungal-type domain-containing protein. (704 aa)
PV07_03726Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (487 aa)
PV07_03586Uncharacterized protein. (302 aa)
PV07_03482Kri1_C domain-containing protein. (609 aa)
PV07_02476Uncharacterized protein. (376 aa)
PV07_06255WD_REPEATS_REGION domain-containing protein. (1002 aa)
PV07_05873PINc domain-containing protein. (194 aa)
PV07_01771Beta-lactamase domain-containing protein. (384 aa)
PV07_01488rRNA 2'-O-methyltransferase fibrillarin. (317 aa)
PV07_08066Uncharacterized protein. (799 aa)
PV07_01256Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PV07_02071Bms1-type G domain-containing protein. (1176 aa)
PV07_07327Uncharacterized protein. (1104 aa)
PV07_01664Uncharacterized protein. (1126 aa)
PV07_01593Uncharacterized protein. (745 aa)
PV07_06898Fcf2 domain-containing protein. (231 aa)
PV07_0456618S rRNA biogenesis protein RCL1. (407 aa)
PV07_01116Glyco_hydro_cc domain-containing protein. (805 aa)
PV07_0107160S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (516 aa)
PV07_04064Exonuclease domain-containing protein. (445 aa)
PV07_09202C2H2-type domain-containing protein. (523 aa)
PV07_00449Ribonuclease P protein subunit. (262 aa)
PV07_03473Zn(2)-C6 fungal-type domain-containing protein. (716 aa)
PV07_03302Uncharacterized protein. (734 aa)
PV07_03242Uncharacterized protein. (132 aa)
PV07_03214Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (322 aa)
PV07_04217Uncharacterized protein; Belongs to the AAA ATPase family. (695 aa)
PV07_04066WD_REPEATS_REGION domain-containing protein. (1020 aa)
PV07_03897Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (661 aa)
PV07_02798GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
PV07_03669Uncharacterized protein. (757 aa)
PV07_03554U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (760 aa)
PV07_11888Nop domain-containing protein. (653 aa)
PV07_11762Ribosomal RNA small subunit methyltransferase NEP1. (260 aa)
PV07_02437Uncharacterized protein. (304 aa)
PV07_055055'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1415 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
PV07_05188Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (385 aa)
PV07_05793WD_REPEATS_REGION domain-containing protein. (601 aa)
PV07_12301Importin N-terminal domain-containing protein. (1072 aa)
PV07_05615H/ACA ribonucleoprotein complex subunit 3. (64 aa)
PV07_05522WD_REPEATS_REGION domain-containing protein. (899 aa)
PV07_07995U3 small nucleolar RNA-associated protein 22. (1150 aa)
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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