Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APD08418.1 | APD09037.1 | A0O31_00191 | A0O31_00866 | Agmatinase SpeB; Belongs to the arginase family. | Carbon-nitrogen hydrolase family protein. | 0.928 |
| APD08418.1 | argD | A0O31_00191 | A0O31_00225 | Agmatinase SpeB; Belongs to the arginase family. | Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.947 |
| APD08418.1 | speA | A0O31_00191 | A0O31_01030 | Agmatinase SpeB; Belongs to the arginase family. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.939 |
| APD08418.1 | speE | A0O31_00191 | A0O31_01958 | Agmatinase SpeB; Belongs to the arginase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.944 |
| APD08435.1 | APD09436.1 | A0O31_00210 | A0O31_01303 | Argininosuccinate lyase. | Acetyltransferase; Belongs to the acetyltransferase family. | 0.926 |
| APD08435.1 | APD09703.1 | A0O31_00210 | A0O31_01594 | Argininosuccinate lyase. | Arginase; Belongs to the arginase family. | 0.816 |
| APD08435.1 | APD10080.1 | A0O31_00210 | A0O31_02008 | Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.774 |
| APD08435.1 | argB | A0O31_00210 | A0O31_00994 | Argininosuccinate lyase. | N-acetylglutamate kinase ArgB-2; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.687 |
| APD08435.1 | argC_1 | A0O31_00210 | A0O31_00869 | Argininosuccinate lyase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of [LysW]- aminoadipate 6-phosphate to yield [LysW]-aminoadipate 6-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.622 |
| APD08435.1 | argC_2 | A0O31_00210 | A0O31_02010 | Argininosuccinate lyase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.668 |
| APD08435.1 | argD | A0O31_00210 | A0O31_00225 | Argininosuccinate lyase. | Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.732 |
| APD08435.1 | argG | A0O31_00210 | A0O31_01301 | Argininosuccinate lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.993 |
| APD08435.1 | argH | A0O31_00210 | A0O31_01302 | Argininosuccinate lyase. | Argininosuccinate lyase. | 0.926 |
| APD08435.1 | argJ | A0O31_00210 | A0O31_02011 | Argininosuccinate lyase. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.687 |
| APD08435.1 | argR | A0O31_00210 | A0O31_01511 | Argininosuccinate lyase. | Arginine repressor/activator; Regulates arginine biosynthesis genes. | 0.668 |
| APD08435.1 | lysZ | A0O31_00210 | A0O31_00868 | Argininosuccinate lyase. | Acetylglutamate/acetylaminoadipate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily. | 0.691 |
| APD08435.1 | speA | A0O31_00210 | A0O31_01030 | Argininosuccinate lyase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.818 |
| APD09037.1 | APD08418.1 | A0O31_00866 | A0O31_00191 | Carbon-nitrogen hydrolase family protein. | Agmatinase SpeB; Belongs to the arginase family. | 0.928 |
| APD09037.1 | APD09041.1 | A0O31_00866 | A0O31_00870 | Carbon-nitrogen hydrolase family protein. | Lysine biosynthesis protein LysX; Belongs to the RimK family. | 0.739 |
| APD09037.1 | APD09043.1 | A0O31_00866 | A0O31_00872 | Carbon-nitrogen hydrolase family protein. | CSL zinc finger. | 0.587 |
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