(50 nodes) Binding-protein-dependent transport system inner membrane component, and Bacterial extracellular solute-binding protein network (Luteipulveratus mongoliensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKU15291.1	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AKU15292.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	AKU15293.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
	AKU15506.1	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	AKU15507.1	Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	AKU15508.1	Sugar ABC transporter sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
	AKU18676.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	AKU15509.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	AKU18706.1	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AKU18707.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AKU18708.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
	AKU15717.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (359 aa)
	AKU18769.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	AKU15945.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	AKU15946.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
	AKU18884.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
	AKU18885.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AKU16512.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
	AKU18886.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
	AKU16513.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AKU18887.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	AKU16523.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	AKU16524.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
	AKU16917.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AKU18969.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AKU18970.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
	AKU16918.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
	AKU19012.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AKU17106.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	AKU17107.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
	AKU19013.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	AKU17202.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AKU17203.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AKU19041.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	AKU17471.1	Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
	AKU17472.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	AKU17473.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AKU17474.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
	AKU19123.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AKU17540.1	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AKU17541.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)
	AKU17543.1	Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (604 aa)
	AKU17544.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	AKU17545.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	AKU17546.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
	AKU17547.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	AKU17708.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (416 aa)
	AKU17709.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	AKU17710.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AKU17711.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)

Your Current Organism:

Luteipulveratus mongoliensis

NCBI taxonomy Id: 571913
Other names: Dermacoccaceae bacterium MN07-A0370, L. mongoliensis, Luteipulveratus mongoliensis Ara et al. 2010, NBRC 105296, VTCC D9-09, strain MN07-A0370

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU15291.1	AKU15292.1	VV02_04485	VV02_04490	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AKU15291.1	AKU15293.1	VV02_04485	VV02_04495	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
AKU15291.1	AKU15509.1	VV02_04485	VV02_05950	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AKU15291.1	AKU17202.1	VV02_04485	VV02_17295	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AKU15291.1	AKU17540.1	VV02_04485	VV02_19665	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AKU15291.1	AKU17541.1	VV02_04485	VV02_19670	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AKU15291.1	AKU17547.1	VV02_04485	VV02_19705	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AKU15291.1	AKU18676.1	VV02_04485	VV02_05945	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
AKU15291.1	AKU18706.1	VV02_04485	VV02_06850	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AKU15291.1	AKU18707.1	VV02_04485	VV02_06855	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
AKU15291.1	AKU18708.1	VV02_04485	VV02_06860	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
AKU15291.1	AKU18769.1	VV02_04485	VV02_08895	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
AKU15291.1	AKU18884.1	VV02_04485	VV02_12630	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AKU15291.1	AKU18887.1	VV02_04485	VV02_12655	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
AKU15291.1	AKU18969.1	VV02_04485	VV02_15360	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
AKU15291.1	AKU19012.1	VV02_04485	VV02_16625	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.481
AKU15291.1	AKU19123.1	VV02_04485	VV02_19660	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
AKU15292.1	AKU15291.1	VV02_04490	VV02_04485	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AKU15292.1	AKU15293.1	VV02_04490	VV02_04495	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AKU15292.1	AKU15717.1	VV02_04490	VV02_07385	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.657

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