(37 nodes) Biological process involved in interspecies interaction between organisms network (Luteipulveratus mongoliensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKU15234.1	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (294 aa)
	AKU14630.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	AKU14856.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	AKU14924.1	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
	AKU14950.1	DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
	AKU18600.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)
	AKU15129.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
	AKU15130.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	AKU15131.1	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	AKU15132.1	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	AKU15133.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	AKU15157.1	Growth inhibitor PemK; Toxic component of a type II toxin-antitoxin (TA) system. (128 aa)
	AKU15219.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (673 aa)
	AKU15377.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
	AKU15475.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AKU15754.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
	AKU15774.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (520 aa)
	AKU15861.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
	AKU16117.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
	AKU16136.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	AKU16248.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
	AKU18828.1	Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
	AKU16317.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	AKU18948.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	AKU19031.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
	AKU17193.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
	AKU19051.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
	AKU19094.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
	AKU17617.1	Molybdopterin biosynthesis-like protein MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: Protein [...] (374 aa)
	AKU17694.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
	AKU17741.1	Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
	AKU17903.1	mRNA interferase MazF3; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
	AKU17951.1	mRNA interferase MazF9; Toxic component of a type II toxin-antitoxin (TA) system. (116 aa)
	AKU18065.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
	AKU18178.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
	AKU18320.1	Glycine/betaine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	AKU18487.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)

Your Current Organism:

Luteipulveratus mongoliensis

NCBI taxonomy Id: 571913
Other names: Dermacoccaceae bacterium MN07-A0370, L. mongoliensis, Luteipulveratus mongoliensis Ara et al. 2010, NBRC 105296, VTCC D9-09, strain MN07-A0370

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU14856.1	AKU16117.1	VV02_01540	VV02_10005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
AKU14950.1	AKU15774.1	VV02_02165	VV02_07765	DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.961
AKU15129.1	AKU15130.1	VV02_03380	VV02_03385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AKU15129.1	AKU15131.1	VV02_03380	VV02_03390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AKU15129.1	AKU15132.1	VV02_03380	VV02_03395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
AKU15129.1	AKU15133.1	VV02_03380	VV02_03400	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AKU15129.1	AKU18600.1	VV02_03380	VV02_03375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AKU15130.1	AKU15129.1	VV02_03385	VV02_03380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AKU15130.1	AKU15131.1	VV02_03385	VV02_03390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AKU15130.1	AKU15132.1	VV02_03385	VV02_03395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
AKU15130.1	AKU15133.1	VV02_03385	VV02_03400	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AKU15130.1	AKU18600.1	VV02_03385	VV02_03375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AKU15131.1	AKU15129.1	VV02_03390	VV02_03380	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AKU15131.1	AKU15130.1	VV02_03390	VV02_03385	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AKU15131.1	AKU15132.1	VV02_03390	VV02_03395	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
AKU15131.1	AKU15133.1	VV02_03390	VV02_03400	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AKU15131.1	AKU18600.1	VV02_03390	VV02_03375	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AKU15132.1	AKU15129.1	VV02_03395	VV02_03380	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
AKU15132.1	AKU15130.1	VV02_03395	VV02_03385	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
AKU15132.1	AKU15131.1	VV02_03395	VV02_03390	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959

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