(38 nodes) Nuclear pore, and Ran binding domain network (Trichomonas vaginalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_456890	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (299 aa)
	TVAG_250050	Nuclear pore protein. (770 aa)
	TVAG_237140	Mitochondrial-type HSP70, putative; Belongs to the heat shock protein 70 family. (629 aa)
	TVAG_062520	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (186 aa)
	TVAG_062650	RRM domain-containing protein. (176 aa)
	TVAG_225510	Uncharacterized protein. (1480 aa)
	TVAG_303500	Nup54 domain-containing protein. (290 aa)
	TVAG_150040	Uncharacterized protein. (1512 aa)
	TVAG_150240	Uncharacterized protein. (725 aa)
	TVAG_208720	Uncharacterized protein. (1286 aa)
	TVAG_223970	Nup54 domain-containing protein. (277 aa)
	TVAG_486770	Uncharacterized protein. (670 aa)
	TVAG_351910	RanBP1 domain containing protein. (366 aa)
	TVAG_212410	Nup54 domain-containing protein. (293 aa)
	TVAG_430450	Nucleoporin_N domain-containing protein. (1144 aa)
	TVAG_106810	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (321 aa)
	TVAG_358810	Uncharacterized protein. (280 aa)
	TVAG_109470	Membrane protein, putative. (255 aa)
	TVAG_088510	Nucleoporin_N domain-containing protein. (1060 aa)
	TVAG_417960	Peptidase S59 domain-containing protein. (426 aa)
	TVAG_239960	WD_REPEATS_REGION domain-containing protein. (330 aa)
	TVAG_050170	BIG2 domain-containing protein. (1501 aa)
	TVAG_151800	RanBP1 domain containing protein. (139 aa)
	TVAG_319090	Uncharacterized protein. (1423 aa)
	TVAG_232720	Uncharacterized protein. (1098 aa)
	TVAG_398870	Uncharacterized protein. (1208 aa)
	TVAG_051520	Viral A-type inclusion protein, putative. (2271 aa)
	TVAG_286750	Nuclear pore protein. (738 aa)
	TVAG_080080	RanBP1 domain containing protein. (378 aa)
	TVAG_011300	Uncharacterized protein. (1357 aa)
	TVAG_414440	WD_REPEATS_REGION domain-containing protein. (347 aa)
	TVAG_017930	Uncharacterized protein. (386 aa)
	TVAG_032710	Nucleoporin_N domain-containing protein. (1142 aa)
	TVAG_467280	Uncharacterized protein. (389 aa)
	TVAG_337260	RanBP1 domain containing protein. (218 aa)
	TVAG_229460	Nsp1_C domain-containing protein. (222 aa)
	TVAG_289360	Uncharacterized protein. (294 aa)
	TVAG_327680	Uncharacterized protein. (316 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_011300	TVAG_017930	A2FDN7	A2FET2	Uncharacterized protein.	Uncharacterized protein.	0.820
TVAG_011300	TVAG_032710	A2FDN7	A2FMI6	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.966
TVAG_011300	TVAG_050170	A2FDN7	A2EJE5	Uncharacterized protein.	BIG2 domain-containing protein.	0.909
TVAG_011300	TVAG_051520	A2FDN7	A2EZ87	Uncharacterized protein.	Viral A-type inclusion protein, putative.	0.926
TVAG_011300	TVAG_062520	A2FDN7	A2DLL4	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.841
TVAG_011300	TVAG_062650	A2FDN7	A2DLM7	Uncharacterized protein.	RRM domain-containing protein.	0.831
TVAG_011300	TVAG_080080	A2FDN7	A2FBG1	Uncharacterized protein.	RanBP1 domain containing protein.	0.999
TVAG_011300	TVAG_088510	A2FDN7	A2EAZ6	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.966
TVAG_011300	TVAG_106810	A2FDN7	A2E6H3	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.831
TVAG_011300	TVAG_109470	A2FDN7	A2EAD6	Uncharacterized protein.	Membrane protein, putative.	0.926
TVAG_011300	TVAG_150040	A2FDN7	A2DRQ6	Uncharacterized protein.	Uncharacterized protein.	0.909
TVAG_011300	TVAG_150240	A2FDN7	A2DRS6	Uncharacterized protein.	Uncharacterized protein.	0.966
TVAG_011300	TVAG_151800	A2FDN7	A2ELU5	Uncharacterized protein.	RanBP1 domain containing protein.	0.913
TVAG_011300	TVAG_208720	A2FDN7	A2DVB4	Uncharacterized protein.	Uncharacterized protein.	0.909
TVAG_011300	TVAG_212410	A2FDN7	A2E2N1	Uncharacterized protein.	Nup54 domain-containing protein.	0.951
TVAG_011300	TVAG_223970	A2FDN7	A2DW20	Uncharacterized protein.	Nup54 domain-containing protein.	0.951
TVAG_011300	TVAG_225510	A2FDN7	A2DNT0	Uncharacterized protein.	Uncharacterized protein.	0.909
TVAG_011300	TVAG_229460	A2FDN7	A2FVJ9	Uncharacterized protein.	Nsp1_C domain-containing protein.	0.967
TVAG_011300	TVAG_232720	A2FDN7	A2EUA2	Uncharacterized protein.	Uncharacterized protein.	0.966
TVAG_011300	TVAG_237140	A2FDN7	A2DCR4	Uncharacterized protein.	Mitochondrial-type HSP70, putative; Belongs to the heat shock protein 70 family.	0.563