(22 nodes) Intraciliary transport particle B network (Trichomonas vaginalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_183170	TPR Domain containing protein. (644 aa)
	TVAG_035360	Uncharacterized protein. (327 aa)
	TVAG_021360	LOC300675 protein, putative. (368 aa)
	TVAG_062510	Clusterin associated protein, putative. (327 aa)
	TVAG_235120	Uncharacterized protein. (397 aa)
	TVAG_340650	Uncharacterized protein. (397 aa)
	TVAG_392700	TPR Domain containing protein. (723 aa)
	TVAG_038480	Uncharacterized protein. (559 aa)
	TVAG_246050	LOC300675 protein, putative. (315 aa)
	TVAG_061760	Selective LIM binding factor, putative. (1673 aa)
	TVAG_109650	Uncharacterized protein. (465 aa)
	TVAG_429900	TPR Domain containing protein. (564 aa)
	TVAG_383970	WD_REPEATS_REGION domain-containing protein. (757 aa)
	TVAG_324940	TPR Domain containing protein. (705 aa)
	TVAG_395360	Uncharacterized protein. (644 aa)
	TVAG_381870	Huntingtin-interacting protein, putative. (373 aa)
	TVAG_123120	Uncharacterized protein. (295 aa)
	TVAG_327960	Selective LIM binding factor, putative. (1664 aa)
	TVAG_480610	Uncharacterized protein. (229 aa)
	TVAG_009330	IFT81_CH domain-containing protein. (614 aa)
	TVAG_293390	LOC300675 protein, putative. (238 aa)
	TVAG_500680	Uncharacterized protein. (149 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_009330	TVAG_021360	A2FYV1	A2DHB8	IFT81_CH domain-containing protein.	LOC300675 protein, putative.	0.984
TVAG_009330	TVAG_035360	A2FYV1	A2DAL0	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.980
TVAG_009330	TVAG_038480	A2FYV1	A2DY04	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.972
TVAG_009330	TVAG_061760	A2FYV1	A2E7U1	IFT81_CH domain-containing protein.	Selective LIM binding factor, putative.	0.989
TVAG_009330	TVAG_062510	A2FYV1	A2DLL3	IFT81_CH domain-containing protein.	Clusterin associated protein, putative.	0.980
TVAG_009330	TVAG_109650	A2FYV1	A2EAF4	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.999
TVAG_009330	TVAG_123120	A2FYV1	A2FH83	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.972
TVAG_009330	TVAG_183170	A2FYV1	A2D955	IFT81_CH domain-containing protein.	TPR Domain containing protein.	0.982
TVAG_009330	TVAG_235120	A2FYV1	A2DPN1	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.991
TVAG_009330	TVAG_246050	A2FYV1	A2E4R3	IFT81_CH domain-containing protein.	LOC300675 protein, putative.	0.984
TVAG_009330	TVAG_293390	A2FYV1	A2G4P5	IFT81_CH domain-containing protein.	LOC300675 protein, putative.	0.984
TVAG_009330	TVAG_324940	A2FYV1	A2F129	IFT81_CH domain-containing protein.	TPR Domain containing protein.	0.985
TVAG_009330	TVAG_327960	A2FYV1	A2FKW9	IFT81_CH domain-containing protein.	Selective LIM binding factor, putative.	0.987
TVAG_009330	TVAG_340650	A2FYV1	A2DTM4	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.991
TVAG_009330	TVAG_381870	A2FYV1	A2F290	IFT81_CH domain-containing protein.	Huntingtin-interacting protein, putative.	0.999
TVAG_009330	TVAG_383970	A2FYV1	A2F096	IFT81_CH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
TVAG_009330	TVAG_392700	A2FYV1	A2DWX1	IFT81_CH domain-containing protein.	TPR Domain containing protein.	0.985
TVAG_009330	TVAG_395360	A2FYV1	A2F1C5	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.982
TVAG_009330	TVAG_429900	A2FYV1	A2EI66	IFT81_CH domain-containing protein.	TPR Domain containing protein.	0.972
TVAG_009330	TVAG_480610	A2FYV1	A2FLG1	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.999