(25 nodes) Mixed, incl. Histone deacetylation, and Transforming growth factor beta regulator 1 network (Trichomonas vaginalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_185870	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (435 aa)
	TVAG_094040	WD repeat protein, putative. (454 aa)
	TVAG_013820	WD repeat protein, putative. (89 aa)
	TVAG_283800	MULE domain-containing protein. (567 aa)
	TVAG_192820	Myb-like DNA-binding domain containing protein. (520 aa)
	TVAG_178760	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (425 aa)
	TVAG_463050	MGC80481 protein, putative. (280 aa)
	TVAG_004610	LisH domain-containing protein. (456 aa)
	TVAG_252660	HDAC_interact domain-containing protein. (742 aa)
	TVAG_426760	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (394 aa)
	TVAG_491010	Myb-like DNA-binding domain containing protein. (354 aa)
	TVAG_028170	Myb-like DNA-binding domain containing protein. (390 aa)
	znf1	Zinc finger, C2H2 type family protein. (276 aa)
	TVAG_358160	Uncharacterized protein. (1041 aa)
	TVAG_059170	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (418 aa)
	TVAG_350530	F/Y-rich N-terminus family protein. (1436 aa)
	TVAG_337660	BTB/POZ domain containing protein. (488 aa)
	TVAG_439490	HDAC_interact domain-containing protein. (742 aa)
	TVAG_168190	Uncharacterized protein. (328 aa)
	TVAG_226910	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (415 aa)
	TVAG_390760	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (453 aa)
	TVAG_448150	Uncharacterized protein. (457 aa)
	TVAG_383320	Myb-like DNA-binding domain containing protein. (590 aa)
	TVAG_323680	HSA domain-containing protein. (813 aa)
	TVAG_173380	Uncharacterized protein. (1232 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_004610	TVAG_028170	A2DT23	A2E556	LisH domain-containing protein.	Myb-like DNA-binding domain containing protein.	0.860
TVAG_004610	TVAG_059170	A2DT23	A2ERJ2	LisH domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.850
TVAG_004610	TVAG_168190	A2DT23	A2FBI7	LisH domain-containing protein.	Uncharacterized protein.	0.860
TVAG_004610	TVAG_173380	A2DT23	A2G3H1	LisH domain-containing protein.	Uncharacterized protein.	0.532
TVAG_004610	TVAG_178760	A2DT23	A2DIM8	LisH domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.850
TVAG_004610	TVAG_185870	A2DT23	A2D8N0	LisH domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.850
TVAG_004610	TVAG_192820	A2DT23	A2DGZ6	LisH domain-containing protein.	Myb-like DNA-binding domain containing protein.	0.860
TVAG_004610	TVAG_226910	A2DT23	A2FCD5	LisH domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.850
TVAG_004610	TVAG_252660	A2DT23	A2DW08	LisH domain-containing protein.	HDAC_interact domain-containing protein.	0.695
TVAG_004610	TVAG_283800	A2DT23	A2DET4	LisH domain-containing protein.	MULE domain-containing protein.	0.474
TVAG_004610	TVAG_323680	A2DT23	A2FTW3	LisH domain-containing protein.	HSA domain-containing protein.	0.860
TVAG_004610	TVAG_337660	A2DT23	A2EWL2	LisH domain-containing protein.	BTB/POZ domain containing protein.	0.474
TVAG_004610	TVAG_350530	A2DT23	A2ESJ8	LisH domain-containing protein.	F/Y-rich N-terminus family protein.	0.532
TVAG_004610	TVAG_358160	A2DT23	A2ELC4	LisH domain-containing protein.	Uncharacterized protein.	0.532
TVAG_004610	TVAG_383320	A2DT23	A2FSG2	LisH domain-containing protein.	Myb-like DNA-binding domain containing protein.	0.860
TVAG_004610	TVAG_390760	A2DT23	A2FDZ0	LisH domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.850
TVAG_004610	TVAG_426760	A2DT23	A2DYU2	LisH domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.850
TVAG_004610	TVAG_439490	A2DT23	A2FAG8	LisH domain-containing protein.	HDAC_interact domain-containing protein.	0.695
TVAG_004610	TVAG_463050	A2DT23	A2DM16	LisH domain-containing protein.	MGC80481 protein, putative.	0.730
TVAG_004610	TVAG_491010	A2DT23	A2E044	LisH domain-containing protein.	Myb-like DNA-binding domain containing protein.	0.810