13 items (Trichomonas vaginalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_186530	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	TVAG_192570	Rtt106 domain-containing protein. (493 aa)
	TVAG_494320	RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein. (124 aa)
	TVAG_434510	Uncharacterized protein. (73 aa)
	TVAG_028840	TPR Domain containing protein. (903 aa)
	TVAG_212800	Clan MG, familly M24, aminopeptidase P-like metallopeptidase. (967 aa)
	TVAG_221960	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative. (94 aa)
	TVAG_420180	KOW motif family protein. (900 aa)
	TVAG_145250	SH2 domain containing protein. (1360 aa)
	TVAG_328410	RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein. (322 aa)
	TVAG_123470	CDC73_C domain-containing protein. (385 aa)
	TVAG_032660	Uncharacterized protein. (256 aa)
	TVAG_107370	Transcription initiation protein, putative. (123 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_028840	TVAG_032660	A2E0D1	A2FMI1	TPR Domain containing protein.	Uncharacterized protein.	0.960
TVAG_028840	TVAG_107370	A2E0D1	A2FSB6	TPR Domain containing protein.	Transcription initiation protein, putative.	0.997
TVAG_028840	TVAG_123470	A2E0D1	A2FCS3	TPR Domain containing protein.	CDC73_C domain-containing protein.	0.999
TVAG_028840	TVAG_145250	A2E0D1	A2EUK7	TPR Domain containing protein.	SH2 domain containing protein.	0.989
TVAG_028840	TVAG_186530	A2E0D1	A2D8U6	TPR Domain containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.982
TVAG_028840	TVAG_192570	A2E0D1	A2DGX1	TPR Domain containing protein.	Rtt106 domain-containing protein.	0.999
TVAG_028840	TVAG_212800	A2E0D1	A2E2S0	TPR Domain containing protein.	Clan MG, familly M24, aminopeptidase P-like metallopeptidase.	0.999
TVAG_028840	TVAG_221960	A2E0D1	A2E3F1	TPR Domain containing protein.	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative.	0.910
TVAG_028840	TVAG_328410	A2E0D1	A2F4R6	TPR Domain containing protein.	RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.	0.989
TVAG_028840	TVAG_420180	A2E0D1	A2ED41	TPR Domain containing protein.	KOW motif family protein.	0.998
TVAG_028840	TVAG_434510	A2E0D1	A2DSN4	TPR Domain containing protein.	Uncharacterized protein.	0.971
TVAG_028840	TVAG_494320	A2E0D1	A2DQ63	TPR Domain containing protein.	RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.	0.967
TVAG_032660	TVAG_028840	A2FMI1	A2E0D1	Uncharacterized protein.	TPR Domain containing protein.	0.960
TVAG_032660	TVAG_107370	A2FMI1	A2FSB6	Uncharacterized protein.	Transcription initiation protein, putative.	0.998
TVAG_032660	TVAG_123470	A2FMI1	A2FCS3	Uncharacterized protein.	CDC73_C domain-containing protein.	0.978
TVAG_032660	TVAG_145250	A2FMI1	A2EUK7	Uncharacterized protein.	SH2 domain containing protein.	0.956
TVAG_032660	TVAG_186530	A2FMI1	A2D8U6	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.996
TVAG_032660	TVAG_192570	A2FMI1	A2DGX1	Uncharacterized protein.	Rtt106 domain-containing protein.	0.980
TVAG_032660	TVAG_212800	A2FMI1	A2E2S0	Uncharacterized protein.	Clan MG, familly M24, aminopeptidase P-like metallopeptidase.	0.982
TVAG_032660	TVAG_221960	A2FMI1	A2E3F1	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative.	0.971