STRINGSTRING
TVAG_186530 TVAG_186530 TVAG_192570 TVAG_192570 TVAG_494320 TVAG_494320 TVAG_434510 TVAG_434510 TVAG_028840 TVAG_028840 TVAG_212800 TVAG_212800 TVAG_221960 TVAG_221960 TVAG_420180 TVAG_420180 TVAG_145250 TVAG_145250 TVAG_328410 TVAG_328410 TVAG_123470 TVAG_123470 TVAG_032660 TVAG_032660 TVAG_107370 TVAG_107370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TVAG_186530DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
TVAG_192570Rtt106 domain-containing protein. (493 aa)
TVAG_494320RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein. (124 aa)
TVAG_434510Uncharacterized protein. (73 aa)
TVAG_028840TPR Domain containing protein. (903 aa)
TVAG_212800Clan MG, familly M24, aminopeptidase P-like metallopeptidase. (967 aa)
TVAG_221960DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative. (94 aa)
TVAG_420180KOW motif family protein. (900 aa)
TVAG_145250SH2 domain containing protein. (1360 aa)
TVAG_328410RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein. (322 aa)
TVAG_123470CDC73_C domain-containing protein. (385 aa)
TVAG_032660Uncharacterized protein. (256 aa)
TVAG_107370Transcription initiation protein, putative. (123 aa)
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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