(10 nodes) Smc5-Smc6 complex, and Negative regulation of transcription by RNA polymerase II network (Trichomonas vaginalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_186450	MGC53049 protein, putative. (206 aa)
	TVAG_282550	RecF/RecN/SMC N terminal domain containing protein. (1053 aa)
	TVAG_235340	Uncharacterized protein. (895 aa)
	TVAG_447200	Uncharacterized protein. (226 aa)
	TVAG_351770	SMC family, C-terminal domain containing protein. (1084 aa)
	TVAG_281340	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (272 aa)
	TVAG_176480	RecF/RecN/SMC N terminal domain containing protein. (1031 aa)
	TVAG_208250	EF hand family protein. (922 aa)
	TVAG_087370	Uncharacterized protein. (824 aa)
	TVAG_102870	Uncharacterized protein. (201 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_087370	TVAG_176480	A2G5S6	A2FTH1	Uncharacterized protein.	RecF/RecN/SMC N terminal domain containing protein.	0.966
TVAG_087370	TVAG_186450	A2G5S6	A2D8T8	Uncharacterized protein.	MGC53049 protein, putative.	0.964
TVAG_087370	TVAG_208250	A2G5S6	A2FZE8	Uncharacterized protein.	EF hand family protein.	0.617
TVAG_087370	TVAG_281340	A2G5S6	A2F958	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.976
TVAG_087370	TVAG_282550	A2G5S6	A2DEF8	Uncharacterized protein.	RecF/RecN/SMC N terminal domain containing protein.	0.941
TVAG_087370	TVAG_351770	A2G5S6	A2DZR1	Uncharacterized protein.	SMC family, C-terminal domain containing protein.	0.941
TVAG_087370	TVAG_447200	A2G5S6	A2DRZ2	Uncharacterized protein.	Uncharacterized protein.	0.972
TVAG_102870	TVAG_176480	A2GPA1	A2FTH1	Uncharacterized protein.	RecF/RecN/SMC N terminal domain containing protein.	0.966
TVAG_102870	TVAG_186450	A2GPA1	A2D8T8	Uncharacterized protein.	MGC53049 protein, putative.	0.964
TVAG_102870	TVAG_208250	A2GPA1	A2FZE8	Uncharacterized protein.	EF hand family protein.	0.617
TVAG_102870	TVAG_281340	A2GPA1	A2F958	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.976
TVAG_102870	TVAG_282550	A2GPA1	A2DEF8	Uncharacterized protein.	RecF/RecN/SMC N terminal domain containing protein.	0.941
TVAG_102870	TVAG_351770	A2GPA1	A2DZR1	Uncharacterized protein.	SMC family, C-terminal domain containing protein.	0.941
TVAG_102870	TVAG_447200	A2GPA1	A2DRZ2	Uncharacterized protein.	Uncharacterized protein.	0.972
TVAG_176480	TVAG_087370	A2FTH1	A2G5S6	RecF/RecN/SMC N terminal domain containing protein.	Uncharacterized protein.	0.966
TVAG_176480	TVAG_102870	A2FTH1	A2GPA1	RecF/RecN/SMC N terminal domain containing protein.	Uncharacterized protein.	0.966
TVAG_176480	TVAG_186450	A2FTH1	A2D8T8	RecF/RecN/SMC N terminal domain containing protein.	MGC53049 protein, putative.	0.999
TVAG_176480	TVAG_208250	A2FTH1	A2FZE8	RecF/RecN/SMC N terminal domain containing protein.	EF hand family protein.	0.916
TVAG_176480	TVAG_235340	A2FTH1	A2DPQ2	RecF/RecN/SMC N terminal domain containing protein.	Uncharacterized protein.	0.966
TVAG_176480	TVAG_281340	A2FTH1	A2F958	RecF/RecN/SMC N terminal domain containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999