29 items (Trichomonas vaginalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_035090	Bromodomain containing protein. (1230 aa)
	TVAG_198720	Uncharacterized protein. (245 aa)
	TVAG_167010	DNA repair helicase rad25 family protein. (740 aa)
	TVAG_110020	TAF6_C domain-containing protein. (434 aa)
	TVAG_178040	Uncharacterized protein. (123 aa)
	TVAG_478350	Bromodomain containing protein. (227 aa)
	TVAG_490860	DUF3591 domain-containing protein. (1016 aa)
	TVAG_491210	DUF3591 domain-containing protein. (636 aa)
	TVAG_491320	TAF6_C domain-containing protein. (398 aa)
	TVAG_028890	TAF6_C domain-containing protein. (398 aa)
	TVAG_044250	DNA repair helicase rad25 family protein. (744 aa)
	TVAG_444210	Uncharacterized protein. (403 aa)
	TVAG_160840	Transcription initiation factor TFIID subunit A, putative. (126 aa)
	TVAG_364490	Uncharacterized protein. (980 aa)
	TVAG_281960	TAF domain-containing protein. (438 aa)
	TVAG_211830	DUF3591 domain-containing protein. (394 aa)
	TVAG_311560	Uncharacterized protein. (311 aa)
	TVAG_040830	TAFII55_N domain-containing protein. (391 aa)
	TVAG_316930	TAF domain-containing protein. (407 aa)
	TVAG_123480	TAF6_C domain-containing protein. (375 aa)
	TVAG_014960	TAF6_C domain-containing protein. (393 aa)
	TVAG_243280	TAF domain-containing protein. (438 aa)
	TVAG_407780	DUF3591 domain-containing protein. (123 aa)
	TVAG_363210	Bromodomain containing protein. (222 aa)
	TVAG_496230	Bromodomain containing protein. (218 aa)
	TVAG_496260	Bromodomain containing protein. (197 aa)
	TVAG_389350	TFIIE alpha subunit family protein. (334 aa)
	TVAG_121360	Uncharacterized protein. (119 aa)
	TVAG_229880	TAF domain-containing protein. (403 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_014960	TVAG_028890	A2FG65	A2E0D6	TAF6_C domain-containing protein.	TAF6_C domain-containing protein.	0.540
TVAG_014960	TVAG_035090	A2FG65	A2DAI3	TAF6_C domain-containing protein.	Bromodomain containing protein.	0.926
TVAG_014960	TVAG_040830	A2FG65	A2EWP5	TAF6_C domain-containing protein.	TAFII55_N domain-containing protein.	0.961
TVAG_014960	TVAG_044250	A2FG65	A2E0I3	TAF6_C domain-containing protein.	DNA repair helicase rad25 family protein.	0.803
TVAG_014960	TVAG_110020	A2FG65	A2DGK3	TAF6_C domain-containing protein.	TAF6_C domain-containing protein.	0.563
TVAG_014960	TVAG_121360	A2FG65	A2G0V6	TAF6_C domain-containing protein.	Uncharacterized protein.	0.952
TVAG_014960	TVAG_123480	A2FG65	A2FCS4	TAF6_C domain-containing protein.	TAF6_C domain-containing protein.	0.591
TVAG_014960	TVAG_160840	A2FG65	A2E4T9	TAF6_C domain-containing protein.	Transcription initiation factor TFIID subunit A, putative.	0.951
TVAG_014960	TVAG_167010	A2FG65	A2DEA8	TAF6_C domain-containing protein.	DNA repair helicase rad25 family protein.	0.803
TVAG_014960	TVAG_178040	A2FG65	A2DIF6	TAF6_C domain-containing protein.	Uncharacterized protein.	0.952
TVAG_014960	TVAG_198720	A2FG65	A2DDQ7	TAF6_C domain-containing protein.	Uncharacterized protein.	0.865
TVAG_014960	TVAG_211830	A2FG65	A2EID9	TAF6_C domain-containing protein.	DUF3591 domain-containing protein.	0.926
TVAG_014960	TVAG_229880	A2FG65	A2G108	TAF6_C domain-containing protein.	TAF domain-containing protein.	0.540
TVAG_014960	TVAG_243280	A2FG65	A2FI12	TAF6_C domain-containing protein.	TAF domain-containing protein.	0.638
TVAG_014960	TVAG_281960	A2FG65	A2E9R1	TAF6_C domain-containing protein.	TAF domain-containing protein.	0.636
TVAG_014960	TVAG_311560	A2FG65	A2EJW3	TAF6_C domain-containing protein.	Uncharacterized protein.	0.945
TVAG_014960	TVAG_316930	A2FG65	A2F070	TAF6_C domain-containing protein.	TAF domain-containing protein.	0.758
TVAG_014960	TVAG_363210	A2FG65	A2FQI2	TAF6_C domain-containing protein.	Bromodomain containing protein.	0.846
TVAG_014960	TVAG_364490	A2FG65	A2E9G0	TAF6_C domain-containing protein.	Uncharacterized protein.	0.961
TVAG_014960	TVAG_389350	A2FG65	A2FXI4	TAF6_C domain-containing protein.	TFIIE alpha subunit family protein.	0.887