9 items (Trichomonas vaginalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_062000	Uncharacterized protein. (286 aa)
	TVAG_385800	CMGC family protein kinase; Belongs to the protein kinase superfamily. (307 aa)
	TVAG_074590	CMGC family protein kinase; Belongs to the protein kinase superfamily. (346 aa)
	TVAG_212420	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (460 aa)
	TVAG_076540	CMGC family protein kinase; Belongs to the protein kinase superfamily. (373 aa)
	TVAG_359930	CMGC family protein kinase. (373 aa)
	TVAG_030750	Uncharacterized protein. (284 aa)
	TVAG_265810	CMGC family protein kinase; Belongs to the protein kinase superfamily. (353 aa)
	TVAG_369000	Protein kinase domain-containing protein. (756 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_030750	TVAG_062000	A2EYI3	A2E7W5	Uncharacterized protein.	Uncharacterized protein.	0.999
TVAG_030750	TVAG_074590	A2EYI3	A2E3X6	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.635
TVAG_030750	TVAG_076540	A2EYI3	A2D9Q1	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.635
TVAG_030750	TVAG_212420	A2EYI3	A2E2N2	Uncharacterized protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
TVAG_030750	TVAG_265810	A2EYI3	A2F2H8	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.635
TVAG_030750	TVAG_359930	A2EYI3	A2DTB2	Uncharacterized protein.	CMGC family protein kinase.	0.635
TVAG_030750	TVAG_369000	A2EYI3	A2EV05	Uncharacterized protein.	Protein kinase domain-containing protein.	0.635
TVAG_030750	TVAG_385800	A2EYI3	A2G1U4	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.635
TVAG_062000	TVAG_030750	A2E7W5	A2EYI3	Uncharacterized protein.	Uncharacterized protein.	0.999
TVAG_062000	TVAG_074590	A2E7W5	A2E3X6	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.766
TVAG_062000	TVAG_076540	A2E7W5	A2D9Q1	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.766
TVAG_062000	TVAG_212420	A2E7W5	A2E2N2	Uncharacterized protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
TVAG_062000	TVAG_265810	A2E7W5	A2F2H8	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.766
TVAG_062000	TVAG_359930	A2E7W5	A2DTB2	Uncharacterized protein.	CMGC family protein kinase.	0.766
TVAG_062000	TVAG_369000	A2E7W5	A2EV05	Uncharacterized protein.	Protein kinase domain-containing protein.	0.766
TVAG_062000	TVAG_385800	A2E7W5	A2G1U4	Uncharacterized protein.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.766
TVAG_074590	TVAG_030750	A2E3X6	A2EYI3	CMGC family protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.635
TVAG_074590	TVAG_062000	A2E3X6	A2E7W5	CMGC family protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.766
TVAG_074590	TVAG_076540	A2E3X6	A2D9Q1	CMGC family protein kinase; Belongs to the protein kinase superfamily.	CMGC family protein kinase; Belongs to the protein kinase superfamily.	0.540
TVAG_074590	TVAG_359930	A2E3X6	A2DTB2	CMGC family protein kinase; Belongs to the protein kinase superfamily.	CMGC family protein kinase.	0.590