39 items (Trichomonas vaginalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_101300	Bromodomain containing protein. (207 aa)
	TVAG_071770	Actin family protein; Belongs to the actin family. (410 aa)
	TVAG_185690	Bromodomain containing protein. (217 aa)
	TVAG_391590	XYPPX repeat family protein. (496 aa)
	TVAG_319980	Acetyltransferase, GNAT family protein. (409 aa)
	TVAG_340910	Acetyltransferase, GNAT family protein. (365 aa)
	TVAG_495500	Actin family protein; Belongs to the actin family. (394 aa)
	TVAG_256060	Bromodomain containing protein. (228 aa)
	TVAG_028510	Bromodomain containing protein. (231 aa)
	TVAG_043970	Actin family protein; Belongs to the actin family. (409 aa)
	TVAG_212480	RuvB-like helicase; Belongs to the RuvB family. (505 aa)
	TVAG_458660	Bromodomain containing protein. (229 aa)
	TVAG_458990	Uncharacterized protein. (905 aa)
	TVAG_258140	Bromodomain containing protein. (138 aa)
	TVAG_109370	Bromodomain containing protein. (285 aa)
	TVAG_188590	PHD-finger family protein. (706 aa)
	TVAG_308330	Acetyltransferase, GNAT family protein. (359 aa)
	TVAG_497120	Acetyltransferase, GNAT family protein. (395 aa)
	TVAG_311560	Uncharacterized protein. (311 aa)
	TVAG_473850	Acetyltransferase, GNAT family protein. (393 aa)
	TVAG_305550	Bromodomain containing protein. (219 aa)
	TVAG_059320	Acetyltransferase, GNAT family protein. (383 aa)
	TVAG_337450	Chromo domain-containing protein. (1662 aa)
	TVAG_040930	Bromodomain containing protein. (430 aa)
	TVAG_091070	Bromodomain containing protein. (162 aa)
	TVAG_182060	Bromodomain containing protein. (157 aa)
	TVAG_288520	SWIRM domain containing protein. (399 aa)
	TVAG_140850	Polymorphic outer membrane protein, putative. (613 aa)
	TVAG_304290	Uncharacterized protein. (309 aa)
	TVAG_105660	Bromodomain containing protein. (217 aa)
	TVAG_255200	Bromodomain containing protein. (211 aa)
	TVAG_229450	Bromodomain containing protein. (230 aa)
	TVAG_002270	Myb-like DNA-binding domain containing protein. (390 aa)
	TVAG_232800	RuvB-like helicase; Belongs to the RuvB family. (463 aa)
	TVAG_091650	Acetyltransferase, GNAT family protein. (366 aa)
	TVAG_324780	Acetyltransferase, GNAT family protein. (404 aa)
	TVAG_153470	SWIRM domain containing protein. (369 aa)
	TVAG_466220	Uncharacterized protein. (632 aa)
	TVAG_452800	Uncharacterized protein. (495 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_002270	TVAG_028510	A2FVW9	A2E098	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.403
TVAG_002270	TVAG_040930	A2FVW9	A2EWQ5	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.870
TVAG_002270	TVAG_043970	A2FVW9	A2E0F7	Myb-like DNA-binding domain containing protein.	Actin family protein; Belongs to the actin family.	0.843
TVAG_002270	TVAG_059320	A2FVW9	A2ERK7	Myb-like DNA-binding domain containing protein.	Acetyltransferase, GNAT family protein.	0.735
TVAG_002270	TVAG_071770	A2FVW9	A2D880	Myb-like DNA-binding domain containing protein.	Actin family protein; Belongs to the actin family.	0.843
TVAG_002270	TVAG_091070	A2FVW9	A2F611	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.735
TVAG_002270	TVAG_091650	A2FVW9	A2FYQ3	Myb-like DNA-binding domain containing protein.	Acetyltransferase, GNAT family protein.	0.735
TVAG_002270	TVAG_101300	A2FVW9	A2DJL2	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.735
TVAG_002270	TVAG_105660	A2FVW9	A2FLQ5	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.870
TVAG_002270	TVAG_109370	A2FVW9	A2EAC6	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.979
TVAG_002270	TVAG_140850	A2FVW9	A2FEQ9	Myb-like DNA-binding domain containing protein.	Polymorphic outer membrane protein, putative.	0.685
TVAG_002270	TVAG_182060	A2FVW9	A2F6Y8	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.403
TVAG_002270	TVAG_185690	A2FVW9	A2D8L3	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.735
TVAG_002270	TVAG_212480	A2FVW9	A2E2N8	Myb-like DNA-binding domain containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.404
TVAG_002270	TVAG_229450	A2FVW9	A2FVJ8	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.403
TVAG_002270	TVAG_232800	A2FVW9	A2FVZ4	Myb-like DNA-binding domain containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.466
TVAG_002270	TVAG_256060	A2FVW9	A2DZ03	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.403
TVAG_002270	TVAG_258140	A2FVW9	A2E918	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.870
TVAG_002270	TVAG_304290	A2FVW9	A2FGR3	Myb-like DNA-binding domain containing protein.	Uncharacterized protein.	0.977
TVAG_002270	TVAG_305550	A2FVW9	A2ERC9	Myb-like DNA-binding domain containing protein.	Bromodomain containing protein.	0.403