(23 nodes) E2F Family network (Trichomonas vaginalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_444560	E2F_TDP domain-containing protein. (259 aa)
	TVAG_444450	E2F_TDP domain-containing protein. (101 aa)
	TVAG_410150	E2F_TDP domain-containing protein. (240 aa)
	TVAG_145710	E2F_TDP domain-containing protein. (252 aa)
	TVAG_115630	E2F_TDP domain-containing protein. (251 aa)
	TVAG_412440	E2F_TDP domain-containing protein. (247 aa)
	TVAG_252930	E2F_TDP domain-containing protein. (254 aa)
	TVAG_236130	E2F_TDP domain-containing protein. (224 aa)
	TVAG_000100	E2F_TDP domain-containing protein. (236 aa)
	TVAG_077870	E2F_TDP domain-containing protein. (230 aa)
	TVAG_059940	E2F_TDP domain-containing protein. (246 aa)
	TVAG_427230	E2F_TDP domain-containing protein. (175 aa)
	TVAG_229420	E2F_TDP domain-containing protein. (250 aa)
	TVAG_025440	E2F_TDP domain-containing protein. (256 aa)
	TVAG_362740	E2F_TDP domain-containing protein. (254 aa)
	TVAG_362340	E2F_TDP domain-containing protein. (255 aa)
	TVAG_237470	E2F_TDP domain-containing protein. (241 aa)
	TVAG_127220	Uncharacterized protein. (191 aa)
	TVAG_165210	E2F_TDP domain-containing protein. (241 aa)
	TVAG_062990	E2F_TDP domain-containing protein. (182 aa)
	TVAG_146880	E2F_TDP domain-containing protein. (247 aa)
	TVAG_365790	E2F_TDP domain-containing protein. (258 aa)
	TVAG_391360	E2F_TDP domain-containing protein. (254 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_062990	TVAG_127220	A2DLR1	A2E7Y9	E2F_TDP domain-containing protein.	Uncharacterized protein.	0.519
TVAG_062990	TVAG_165210	A2DLR1	A2DUK2	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_062990	TVAG_229420	A2DLR1	A2FVJ5	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_062990	TVAG_236130	A2DLR1	A2F7K8	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_062990	TVAG_362340	A2DLR1	A2E612	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_062990	TVAG_365790	A2DLR1	A2DHM3	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_062990	TVAG_412440	A2DLR1	A2EV57	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_127220	TVAG_062990	A2E7Y9	A2DLR1	Uncharacterized protein.	E2F_TDP domain-containing protein.	0.519
TVAG_127220	TVAG_145710	A2E7Y9	A2EFU0	Uncharacterized protein.	E2F_TDP domain-containing protein.	0.540
TVAG_127220	TVAG_427230	A2E7Y9	A2FNA5	Uncharacterized protein.	E2F_TDP domain-containing protein.	0.519
TVAG_145710	TVAG_127220	A2EFU0	A2E7Y9	E2F_TDP domain-containing protein.	Uncharacterized protein.	0.540
TVAG_145710	TVAG_165210	A2EFU0	A2DUK2	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_145710	TVAG_229420	A2EFU0	A2FVJ5	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_145710	TVAG_236130	A2EFU0	A2F7K8	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_145710	TVAG_362340	A2EFU0	A2E612	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.539
TVAG_145710	TVAG_365790	A2EFU0	A2DHM3	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_145710	TVAG_412440	A2EFU0	A2EV57	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_165210	TVAG_062990	A2DUK2	A2DLR1	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_165210	TVAG_145710	A2DUK2	A2EFU0	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519
TVAG_165210	TVAG_427230	A2DUK2	A2FNA5	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.519