STRINGSTRING
TVAG_417030 TVAG_417030 TVAG_076710 TVAG_076710 TVAG_475950 TVAG_475950 TVAG_250380 TVAG_250380 TVAG_391250 TVAG_391250 TVAG_162880 TVAG_162880 TVAG_129710 TVAG_129710 TVAG_214100 TVAG_214100 TVAG_062480 TVAG_062480 TVAG_453940 TVAG_453940 TVAG_388620 TVAG_388620 TVAG_206220 TVAG_206220 TVAG_463950 TVAG_463950 TVAG_097790 TVAG_097790 TVAG_139330 TVAG_139330 TVAG_127020 TVAG_127020 TVAG_447010 TVAG_447010 TVAG_260260 TVAG_260260 TVAG_056670 TVAG_056670 TVAG_363680 TVAG_363680 TVAG_463400 TVAG_463400 TVAG_343030 TVAG_343030 TVAG_353500 TVAG_353500 TVAG_081070 TVAG_081070 TVAG_081110 TVAG_081110 TVAG_473940 TVAG_473940 TVAG_345370 TVAG_345370 TVAG_324910 TVAG_324910 TVAG_493080 TVAG_493080 TVAG_317830 TVAG_317830 TVAG_179860 TVAG_179860 TVAG_316180 TVAG_316180 TVAG_437970 TVAG_437970 TVAG_107400 TVAG_107400 TVAG_529870 TVAG_529870 TVAG_582650 TVAG_582650
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TVAG_417030RRM domain-containing protein. (379 aa)
TVAG_076710Sm protein. (81 aa)
TVAG_475950Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (191 aa)
TVAG_250380Uncharacterized protein. (734 aa)
TVAG_391250Poly polymerase central domain containing protein. (467 aa)
TVAG_162880Uncharacterized protein. (395 aa)
TVAG_129710RRM domain-containing protein. (416 aa)
TVAG_214100Small nuclear ribonucleoprotein Sm D3. (119 aa)
TVAG_062480Uncharacterized protein. (397 aa)
TVAG_453940Uncharacterized protein. (400 aa)
TVAG_388620Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (494 aa)
TVAG_206220RRM domain-containing protein. (290 aa)
TVAG_463950Fip1 motif family protein. (191 aa)
TVAG_097790Eukaryotic translation initiation factor 3 subunit 10, putative. (311 aa)
TVAG_139330CCHC-type domain-containing protein. (314 aa)
TVAG_127020Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (508 aa)
TVAG_447010Pre-mRNA splicing factor, putative. (481 aa)
TVAG_260260Small nuclear ribonucleoprotein Sm D3. (112 aa)
TVAG_056670RRM domain-containing protein. (410 aa)
TVAG_363680Cleavage and polyadenylation specificity factor subunit 2. (700 aa)
TVAG_463400Sm protein. (98 aa)
TVAG_343030Suf domain-containing protein. (614 aa)
TVAG_353500Helicase, putative. (890 aa)
TVAG_081070Tho2 domain-containing protein. (963 aa)
TVAG_081110RRM domain-containing protein. (96 aa)
TVAG_473940Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (93 aa)
TVAG_345370Nuclear cap-binding protein subunit 2. (155 aa)
TVAG_324910RRM domain-containing protein. (124 aa)
TVAG_493080Tho2 domain-containing protein. (1094 aa)
TVAG_317830Uncharacterized protein. (398 aa)
TVAG_179860ATP-dependent RNA helicase p47, putative; Belongs to the DEAD box helicase family. (420 aa)
TVAG_316180Uncharacterized protein. (765 aa)
TVAG_437970RNA-metabolising metallo-beta-lactamase family protein. (679 aa)
TVAG_107400RRM domain-containing protein. (144 aa)
TVAG_529870Sm protein. (81 aa)
TVAG_582650Uncharacterized protein. (592 aa)
Your Current Organism:
Trichomonas vaginalis
NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis
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