28 items (Trichomonas vaginalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_186530	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	TVAG_198720	Uncharacterized protein. (245 aa)
	TVAG_167010	DNA repair helicase rad25 family protein. (740 aa)
	TVAG_171980	RNA polymerase Rpb5, C-terminal domain containing protein. (217 aa)
	TVAG_113600	RNA polymerase Rpb5, N-terminal domain containing protein. (202 aa)
	TVAG_494320	RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein. (124 aa)
	TVAG_434510	Uncharacterized protein. (73 aa)
	TVAG_348020	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative. (94 aa)
	TVAG_187730	mRNA capping enzyme, C-terminal domain containing protein. (561 aa)
	TVAG_044250	DNA repair helicase rad25 family protein. (744 aa)
	TVAG_212420	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (460 aa)
	TVAG_221960	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative. (94 aa)
	TVAG_379530	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1177 aa)
	TVAG_062000	Uncharacterized protein. (286 aa)
	TVAG_127190	mRNA cap guanine-N7 methyltransferase. (347 aa)
	TVAG_420180	KOW motif family protein. (900 aa)
	TVAG_322770	Uncharacterized protein. (548 aa)
	TVAG_100760	Transcription factor ssl1 family protein. (394 aa)
	TVAG_030750	Uncharacterized protein. (284 aa)
	TVAG_111540	RNA polymerase Rpb7, N-terminal domain containing protein. (182 aa)
	TVAG_292780	Uncharacterized protein. (532 aa)
	TVAG_442190	Helicase ATP-binding domain-containing protein. (752 aa)
	TVAG_328410	RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein. (322 aa)
	TVAG_290240	Ssl1 domain-containing protein. (166 aa)
	TVAG_258890	mRNA cap guanine-N7 methyltransferase. (355 aa)
	TVAG_352310	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative. (85 aa)
	TVAG_023300	Helicase, putative. (546 aa)
	TVAG_023310	Helicase ATP-binding domain-containing protein. (84 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_023300	TVAG_030750	A2G2G8	A2EYI3	Helicase, putative.	Uncharacterized protein.	0.973
TVAG_023300	TVAG_044250	A2G2G8	A2E0I3	Helicase, putative.	DNA repair helicase rad25 family protein.	0.949
TVAG_023300	TVAG_062000	A2G2G8	A2E7W5	Helicase, putative.	Uncharacterized protein.	0.972
TVAG_023300	TVAG_100760	A2G2G8	A2ENQ3	Helicase, putative.	Transcription factor ssl1 family protein.	0.945
TVAG_023300	TVAG_111540	A2G2G8	A2F013	Helicase, putative.	RNA polymerase Rpb7, N-terminal domain containing protein.	0.918
TVAG_023300	TVAG_113600	A2G2G8	A2DNL3	Helicase, putative.	RNA polymerase Rpb5, N-terminal domain containing protein.	0.908
TVAG_023300	TVAG_167010	A2G2G8	A2DEA8	Helicase, putative.	DNA repair helicase rad25 family protein.	0.949
TVAG_023300	TVAG_171980	A2G2G8	A2DEU9	Helicase, putative.	RNA polymerase Rpb5, C-terminal domain containing protein.	0.908
TVAG_023300	TVAG_186530	A2G2G8	A2D8U6	Helicase, putative.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.915
TVAG_023300	TVAG_198720	A2G2G8	A2DDQ7	Helicase, putative.	Uncharacterized protein.	0.931
TVAG_023300	TVAG_212420	A2G2G8	A2E2N2	Helicase, putative.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.972
TVAG_023300	TVAG_221960	A2G2G8	A2E3F1	Helicase, putative.	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative.	0.891
TVAG_023300	TVAG_290240	A2G2G8	A2F7Q0	Helicase, putative.	Ssl1 domain-containing protein.	0.945
TVAG_023300	TVAG_328410	A2G2G8	A2F4R6	Helicase, putative.	RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein.	0.939
TVAG_023300	TVAG_348020	A2G2G8	A2DSU3	Helicase, putative.	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative.	0.891
TVAG_023300	TVAG_352310	A2G2G8	A2FZ94	Helicase, putative.	DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative.	0.891
TVAG_023300	TVAG_379530	A2G2G8	A2E7H8	Helicase, putative.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
TVAG_023300	TVAG_420180	A2G2G8	A2ED41	Helicase, putative.	KOW motif family protein.	0.615
TVAG_023300	TVAG_434510	A2G2G8	A2DSN4	Helicase, putative.	Uncharacterized protein.	0.931
TVAG_023300	TVAG_442190	A2G2G8	A2F1W2	Helicase, putative.	Helicase ATP-binding domain-containing protein.	0.914