(13 nodes) Forkhead associated domain network (Trichomonas vaginalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVAG_245800	FHA domain containing protein. (342 aa)
	TVAG_183120	FHA domain-containing protein. (365 aa)
	TVAG_319740	FHA domain containing protein. (340 aa)
	TVAG_426690	FHA domain containing protein. (178 aa)
	TVAG_020290	FHA domain-containing protein. (316 aa)
	TVAG_043740	FHA domain containing protein. (167 aa)
	TVAG_029350	FHA domain-containing protein. (347 aa)
	TVAG_018040	FHA domain-containing protein. (328 aa)
	TVAG_428640	FHA domain-containing protein. (352 aa)
	TVAG_234150	FHA domain containing protein. (314 aa)
	TVAG_366930	FHA domain-containing protein. (336 aa)
	TVAG_274160	Uncharacterized protein. (322 aa)
	TVAG_238160	FHA domain containing protein. (316 aa)

Your Current Organism:

Trichomonas vaginalis

NCBI taxonomy Id: 5722
Other names: T. vaginalis, Tritrichomonas vaginalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVAG_018040	TVAG_020290	A2FEU3	A2EQ18	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_018040	TVAG_029350	A2FEU3	A2F527	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_018040	TVAG_043740	A2FEU3	A2EVB4	FHA domain-containing protein.	FHA domain containing protein.	0.540
TVAG_018040	TVAG_183120	A2FEU3	A2D950	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_018040	TVAG_234150	A2FEU3	A2FXP3	FHA domain-containing protein.	FHA domain containing protein.	0.540
TVAG_018040	TVAG_238160	A2FEU3	A2DD16	FHA domain-containing protein.	FHA domain containing protein.	0.540
TVAG_018040	TVAG_366930	A2FEU3	A2FZ79	FHA domain-containing protein.	FHA domain-containing protein.	0.574
TVAG_018040	TVAG_428640	A2FEU3	A2FJ54	FHA domain-containing protein.	FHA domain-containing protein.	0.588
TVAG_020290	TVAG_018040	A2EQ18	A2FEU3	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_020290	TVAG_029350	A2EQ18	A2F527	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_020290	TVAG_043740	A2EQ18	A2EVB4	FHA domain-containing protein.	FHA domain containing protein.	0.540
TVAG_020290	TVAG_183120	A2EQ18	A2D950	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_020290	TVAG_234150	A2EQ18	A2FXP3	FHA domain-containing protein.	FHA domain containing protein.	0.540
TVAG_020290	TVAG_238160	A2EQ18	A2DD16	FHA domain-containing protein.	FHA domain containing protein.	0.540
TVAG_020290	TVAG_366930	A2EQ18	A2FZ79	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_020290	TVAG_428640	A2EQ18	A2FJ54	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_029350	TVAG_018040	A2F527	A2FEU3	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_029350	TVAG_020290	A2F527	A2EQ18	FHA domain-containing protein.	FHA domain-containing protein.	0.540
TVAG_029350	TVAG_043740	A2F527	A2EVB4	FHA domain-containing protein.	FHA domain containing protein.	0.540
TVAG_029350	TVAG_183120	A2F527	A2D950	FHA domain-containing protein.	FHA domain-containing protein.	0.540