STRINGSTRING
HDEF_2052 HDEF_2052 HDEF_2053 HDEF_2053 HDEF_2054 HDEF_2054 HDEF_2055 HDEF_2055 HDEF_2056 HDEF_2056 HDEF_2057 HDEF_2057
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HDEF_2052Phage anti-repressor protein; C terminal truncation; COG3561. (105 aa)
HDEF_2053Putative phage antirepressor. (256 aa)
HDEF_2054Hypothetical protein. (30 aa)
HDEF_2055Phage anti-repressor protein. (263 aa)
HDEF_2056Hypothetical protein. (125 aa)
HDEF_2057SNase-like micrococcal nuclease; COG1525. (171 aa)
Your Current Organism:
Hamiltonella defensa
NCBI taxonomy Id: 572265
Other names: C. Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa str. 5AT (Acyrthosiphon pisum), Candidatus Hamiltonella defensa strain 5AT (Acyrthosiphon pisum)
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