STRINGSTRING
dsrM dsrM dsrK dsrK dsrS dsrS sgpC sgpC glgA glgA nifW nifW ADC62773.1 ADC62773.1 glgC glgC nifH nifH sgpA sgpA glgA-2 glgA-2 soxB soxB ADC63455.1 ADC63455.1 pufC pufC pufM pufM pufL pufL glcB glcB glgB glgB glgC-2 glgC-2 glgA-3 glgA-3 sat sat sgpB sgpB phaC phaC tsdA tsdA phaE phaE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dsrMDsrM; PFAM: Nitrate reductase gamma subunit; KEGG: tbd:Tbd_2479 putative DsrM protein. (243 aa)
dsrKDsrK; KEGG: tgr:Tgr7_2192 reductase, iron-sulfur binding subunit, putative. (524 aa)
dsrSDsrS; KEGG: tgr:Tgr7_2284 hypothetical protein. (368 aa)
sgpCSulfur globule protein SgpC; Structural protein of the sulfur globules, which are intracellular globules that serve for sulfur storage in purple sulfur bacteria. (102 aa)
glgAGlycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (719 aa)
nifWNitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. (114 aa)
ADC62773.1TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: tgr:Tgr7_2552 isocitrate lyase. (435 aa)
glgCNucleotidyl transferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (419 aa)
nifHNitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (294 aa)
sgpASulfur globule protein SgpA; Structural protein of the sulfur globules, which are intracellular globules that serve for sulfur storage in purple sulfur bacteria. (127 aa)
glgA-2Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (499 aa)
soxBSoxB; PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: cte:CT1021 sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family. (594 aa)
ADC63455.1Ribulose-bisphosphate carboxylase; May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity (By similarity). Belongs to the RuBisCO large chain family. Type IV subfamily. (457 aa)
pufCPhotosynthetic reaction centre cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. (383 aa)
pufMPhotosynthetic reaction center, M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (325 aa)
pufLPhotosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (278 aa)
glcBMalate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (724 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (766 aa)
glgC-2Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (423 aa)
glgA-3Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (511 aa)
satKEGG: abo:ABO_0730 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family. (397 aa)
sgpBSulfur globule protein; Structural protein of the sulfur globules, which are intracellular globules that serve for sulfur storage in purple sulfur bacteria. (124 aa)
phaCpoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; Polymerizes D(-)-3-hydroxybutyryl-CoA to create polyhydroxybutyrate (PHB) which consists of thousands of hydroxybutyrate molecules linked end to end. This subunit has catalytic activity that is enhanced 100-fold by PhaE, the non-catalytic subunit. (355 aa)
tsdAThiosulfate dehydrogenase; Catalyzes the oxidation of 2 molecules of thiosulfate to tetrathionate. (270 aa)
phaEpoly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit; Polymerizes D(-)-3-hydroxybutyryl-CoA to create polyhydroxybutyrate (PHB) which consists of thousands of hydroxybutyrate molecules linked end to end. This subunit has no catalytic activity but enhances the activity of PhaC, the catalytic subunit, 100-fold. Belongs to the PHA/PHB synthase family. Type III PhaE subfamily. (357 aa)
Your Current Organism:
Allochromatium vinosum
NCBI taxonomy Id: 572477
Other names: A. vinosum DSM 180, Allochromatium vinosum DSM 180, Allochromatium vinosum str. DSM 180, Allochromatium vinosum strain DSM 180
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.