STRINGSTRING
DMR_03670 DMR_03670 DMR_04340 DMR_04340 DMR_04350 DMR_04350 DMR_28040 DMR_28040 DMR_28050 DMR_28050 DMR_28410 DMR_28410 DMR_28420 DMR_28420 mdtC mdtC mdtB mdtB mdtA mdtA DMR_44610 DMR_44610 DMR_44620 DMR_44620
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DMR_03670Outer membrane efflux protein. (537 aa)
DMR_04340Efflux system protein. (1043 aa)
DMR_04350Efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (401 aa)
DMR_28040Efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1024 aa)
DMR_28050Efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (402 aa)
DMR_28410Efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (426 aa)
DMR_28420Efflux system protein. (1049 aa)
mdtCMultidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1043 aa)
mdtBMultidrug resistance protein MdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1039 aa)
mdtAMultidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)
DMR_44610Putative efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (403 aa)
DMR_44620Putative efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1086 aa)
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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