STRINGSTRING
DMR_00690 DMR_00690 DMR_00740 DMR_00740 DMR_00750 DMR_00750 recN recN DMR_00770 DMR_00770 DMR_00780 DMR_00780 nikE nikE nikD nikD nikC nikC nikB nikB nikA nikA DMR_27640 DMR_27640 DMR_27650 DMR_27650 DMR_27660 DMR_27660 DMR_27670 DMR_27670 DMR_27680 DMR_27680 DMR_27690 DMR_27690 DMR_35960 DMR_35960 DMR_44910 DMR_44910 DMR_44920 DMR_44920
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DMR_00690Putative transposase for insertion sequence element. (451 aa)
DMR_00740Hypothetical membrane protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (290 aa)
DMR_00750Putative cell division ATP-binding protein FtsE. (231 aa)
recNDNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (542 aa)
DMR_00770Putative peptide ABC transporter permease protein. (280 aa)
DMR_00780Putative peptide ABC transporter permease protein. (332 aa)
nikENickel ABC transporter ATP-binding protein. (275 aa)
nikDNickel ABC transporter ATP-binding protein. (271 aa)
nikCNickel ABC transporter permease protein. (279 aa)
nikBNickel ABC transporter permease protein. (315 aa)
nikANickel ABC transporter substrate binding protein precursor. (527 aa)
DMR_27640Hypothetical membrane protein. (194 aa)
DMR_27650Putative ABC transporter ATP-binding protein. (472 aa)
DMR_27660Hypothetical membrane protein. (235 aa)
DMR_27670Hypothetical protein. (337 aa)
DMR_27680Hypothetical protein. (380 aa)
DMR_27690Hypothetical protein. (209 aa)
DMR_35960Putative peptide ABC transporter substrate binding protein. (563 aa)
DMR_44910Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (322 aa)
DMR_44920Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (324 aa)
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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