STRINGSTRING
DMR_00410 DMR_00410 DMR_00420 DMR_00420 DMR_06780 DMR_06780 DMR_34240 DMR_34240 DMR_34250 DMR_34250 cat cat DMR_43870 DMR_43870 DMR_43880 DMR_43880 DMR_44900 DMR_44900 DMR_44930 DMR_44930 DMR_45650 DMR_45650
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DMR_00410Fis family transcriptional regulator. (480 aa)
DMR_00420Hypothetical protein. (120 aa)
DMR_06780Fis family transcriptional regulator. (447 aa)
DMR_34240Hypothetical protein. (151 aa)
DMR_34250Fis family transcriptional regulator. (924 aa)
catPutative chloramphenicol acetyltransferase. (243 aa)
DMR_43870Fis family transcriptional regulator. (492 aa)
DMR_43880Hypothetical protein. (80 aa)
DMR_44900Hypothetical membrane protein; Belongs to the BI1 family. (239 aa)
DMR_44930Hypothetical protein. (163 aa)
DMR_45650Fis family transcriptional regulator. (523 aa)
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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