STRINGSTRING
DMR_25770 DMR_25770 DMR_24120 DMR_24120 DMR_19770 DMR_19770 DMR_19660 DMR_19660 DMR_19650 DMR_19650 xanB xanB rmlC rmlC DMR_16240 DMR_16240 DMR_11530 DMR_11530 DMR_11510 DMR_11510 DMR_11500 DMR_11500 DMR_07570 DMR_07570 DMR_04970 DMR_04970 DMR_02180 DMR_02180 DMR_02030 DMR_02030 DMR_01350 DMR_01350 DMR_44180 DMR_44180 DMR_38650 DMR_38650 DMR_38640 DMR_38640 DMR_35390 DMR_35390 DMR_35320 DMR_35320 DMR_35180 DMR_35180 DMR_29690 DMR_29690
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DMR_25770Putative carbon monoxide dehydrogenase CooA protein. (216 aa)
DMR_24120Hypothetical protein. (155 aa)
DMR_19770Hypothetical protein. (616 aa)
DMR_19660Xre family DNA-binding protein. (186 aa)
DMR_19650Xre family DNA-binding protein. (192 aa)
xanBMannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. (477 aa)
rmlCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (185 aa)
DMR_16240Hypothetical protein. (430 aa)
DMR_11530Hypothetical membrane protein. (498 aa)
DMR_11510AraC family transcriptional regulator. (281 aa)
DMR_11500Hypothetical protein. (130 aa)
DMR_07570Putative isomerase. (136 aa)
DMR_04970Hypothetical protein. (191 aa)
DMR_02180Hypothetical protein. (196 aa)
DMR_02030Hypothetical protein. (175 aa)
DMR_01350Hypothetical protein. (133 aa)
DMR_44180Hypothetical protein. (177 aa)
DMR_38650Hypothetical protein. (214 aa)
DMR_38640Crp family transcriptional regulator. (251 aa)
DMR_35390Hypothetical protein. (105 aa)
DMR_35320Crp family transcriptional regulator. (242 aa)
DMR_35180AraC family transcriptional regulator. (350 aa)
DMR_29690Crp family transcriptional regulator. (240 aa)
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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