STRINGSTRING
ADK79954.1 ADK79954.1 ADK79936.1 ADK79936.1 araB araB araA araA ADK80303.1 ADK80303.1 ADK81168.1 ADK81168.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADK79954.1COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: rle:pRL120033 putative D-allulose-6-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Putative D-allulose-6-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase. (230 aa)
ADK79936.1RbsD or FucU transport; InterPro IPR007721; KEGG: ctc:CTC00903 hypothetical protein; PFAM: RbsD or FucU transport; SPTR: Putative uncharacterized protein; PFAM: RbsD / FucU transport protein family. (134 aa)
araBL-ribulokinase; COGs: COG1069 Ribulose kinase; InterPro IPR005929:IPR018484:IPR018485; KEGG: sli:Slin_1239 L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Ribulokinase; TIGRFAM: L-ribulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase. (559 aa)
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (504 aa)
ADK80303.1RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (155 aa)
ADK81168.1COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: sat:SYN_01763 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase. (220 aa)
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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