(10 nodes) Zinc ion transmembrane transport network (Thermothelomyces thermophilus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MYCTH_2296142	Uncharacterized protein. (56 aa)
	MYCTH_2296144	Uncharacterized protein. (349 aa)
	MYCTH_2073485	Uncharacterized protein. (539 aa)
	MYCTH_2115983	Uncharacterized protein. (358 aa)
	MYCTH_2299322	Uncharacterized protein. (493 aa)
	MYCTH_2300793	Uncharacterized protein. (480 aa)
	MYCTH_2303348	Uncharacterized protein. (388 aa)
	MYCTH_2303843	Uncharacterized protein. (347 aa)
	MYCTH_2303876	Uncharacterized protein. (503 aa)
	MYCTH_54374	Uncharacterized protein. (443 aa)

Your Current Organism:

Thermothelomyces thermophilus

NCBI taxonomy Id: 573729
Other names: Myceliophthora thermophila ATCC 42464, Sporotrichum thermophile ATCC 42464, T. thermophilus ATCC 42464, Thermothelomyces thermophilus ATCC 42464, Thielavia heterothallica ATCC 42464

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MYCTH_2073485	MYCTH_2299322	G2Q1M4	G2Q5M7	Uncharacterized protein.	Uncharacterized protein.	0.665
MYCTH_2073485	MYCTH_2300793	G2Q1M4	G2Q882	Uncharacterized protein.	Uncharacterized protein.	0.909
MYCTH_2073485	MYCTH_2303843	G2Q1M4	G2QDU6	Uncharacterized protein.	Uncharacterized protein.	0.627
MYCTH_2073485	MYCTH_2303876	G2Q1M4	G2QDW2	Uncharacterized protein.	Uncharacterized protein.	0.651
MYCTH_2115983	MYCTH_2300793	G2Q3G6	G2Q882	Uncharacterized protein.	Uncharacterized protein.	0.565
MYCTH_2296142	MYCTH_2300793	G2Q0J6	G2Q882	Uncharacterized protein.	Uncharacterized protein.	0.565
MYCTH_2296144	MYCTH_2300793	G2Q0J7	G2Q882	Uncharacterized protein.	Uncharacterized protein.	0.565
MYCTH_2299322	MYCTH_2073485	G2Q5M7	G2Q1M4	Uncharacterized protein.	Uncharacterized protein.	0.665
MYCTH_2299322	MYCTH_2303843	G2Q5M7	G2QDU6	Uncharacterized protein.	Uncharacterized protein.	0.615
MYCTH_2299322	MYCTH_2303876	G2Q5M7	G2QDW2	Uncharacterized protein.	Uncharacterized protein.	0.615
MYCTH_2300793	MYCTH_2073485	G2Q882	G2Q1M4	Uncharacterized protein.	Uncharacterized protein.	0.909
MYCTH_2300793	MYCTH_2115983	G2Q882	G2Q3G6	Uncharacterized protein.	Uncharacterized protein.	0.565
MYCTH_2300793	MYCTH_2296142	G2Q882	G2Q0J6	Uncharacterized protein.	Uncharacterized protein.	0.565
MYCTH_2300793	MYCTH_2296144	G2Q882	G2Q0J7	Uncharacterized protein.	Uncharacterized protein.	0.565
MYCTH_2300793	MYCTH_2303876	G2Q882	G2QDW2	Uncharacterized protein.	Uncharacterized protein.	0.430
MYCTH_2303843	MYCTH_2073485	G2QDU6	G2Q1M4	Uncharacterized protein.	Uncharacterized protein.	0.627
MYCTH_2303843	MYCTH_2299322	G2QDU6	G2Q5M7	Uncharacterized protein.	Uncharacterized protein.	0.615
MYCTH_2303843	MYCTH_2303876	G2QDU6	G2QDW2	Uncharacterized protein.	Uncharacterized protein.	0.612
MYCTH_2303876	MYCTH_2073485	G2QDW2	G2Q1M4	Uncharacterized protein.	Uncharacterized protein.	0.651
MYCTH_2303876	MYCTH_2299322	G2QDW2	G2Q5M7	Uncharacterized protein.	Uncharacterized protein.	0.615

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