(13 nodes) Cytosolic ribosome network (Thermothelomyces thermophilus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MYCTH_2297948	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
	MYCTH_2122073	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (180 aa)
	MYCTH_2074077	RRN7-type domain-containing protein. (541 aa)
	MYCTH_2297548	Uncharacterized protein. (161 aa)
	MYCTH_87600	Uncharacterized protein. (56 aa)
	MYCTH_2062887	Uncharacterized protein. (256 aa)
	MYCTH_2303426	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	MYCTH_116020	Uncharacterized protein. (116 aa)
	MYCTH_2315051	Ribosomal_L28e domain-containing protein. (149 aa)
	MYCTH_2064349	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
	MYCTH_71369	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	MYCTH_2315781	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
	MYCTH_2316445	KOW domain-containing protein. (138 aa)

Your Current Organism:

Thermothelomyces thermophilus

NCBI taxonomy Id: 573729
Other names: Myceliophthora thermophila ATCC 42464, Sporotrichum thermophile ATCC 42464, T. thermophilus ATCC 42464, Thermothelomyces thermophilus ATCC 42464, Thielavia heterothallica ATCC 42464

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MYCTH_116020	MYCTH_2062887	G2QCW2	G2QCN8	Uncharacterized protein.	Uncharacterized protein.	0.999
MYCTH_116020	MYCTH_2064349	G2QCW2	G2QGF9	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
MYCTH_116020	MYCTH_2074077	G2QCW2	G2Q585	Uncharacterized protein.	RRN7-type domain-containing protein.	0.999
MYCTH_116020	MYCTH_2122073	G2QCW2	G2Q0T4	Uncharacterized protein.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
MYCTH_116020	MYCTH_2297548	G2QCW2	G2Q623	Uncharacterized protein.	Uncharacterized protein.	0.999
MYCTH_116020	MYCTH_2297948	G2QCW2	G2Q025	Uncharacterized protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
MYCTH_116020	MYCTH_2303426	G2QCW2	G2QCN9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.999
MYCTH_116020	MYCTH_2315051	G2QCW2	G2QD80	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.999
MYCTH_116020	MYCTH_2315781	G2QCW2	G2QIT6	Uncharacterized protein.	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	0.999
MYCTH_116020	MYCTH_2316445	G2QCW2	G2QP07	Uncharacterized protein.	KOW domain-containing protein.	0.999
MYCTH_116020	MYCTH_71369	G2QCW2	G2QIJ7	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
MYCTH_116020	MYCTH_87600	G2QCW2	G2Q8G9	Uncharacterized protein.	Uncharacterized protein.	0.999
MYCTH_2062887	MYCTH_116020	G2QCN8	G2QCW2	Uncharacterized protein.	Uncharacterized protein.	0.999
MYCTH_2062887	MYCTH_2064349	G2QCN8	G2QGF9	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
MYCTH_2062887	MYCTH_2074077	G2QCN8	G2Q585	Uncharacterized protein.	RRN7-type domain-containing protein.	0.999
MYCTH_2062887	MYCTH_2122073	G2QCN8	G2Q0T4	Uncharacterized protein.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
MYCTH_2062887	MYCTH_2297548	G2QCN8	G2Q623	Uncharacterized protein.	Uncharacterized protein.	0.999
MYCTH_2062887	MYCTH_2297948	G2QCN8	G2Q025	Uncharacterized protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
MYCTH_2062887	MYCTH_2303426	G2QCN8	G2QCN9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.999
MYCTH_2062887	MYCTH_2315051	G2QCN8	G2QD80	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.999

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