STRINGSTRING
ADL12574.1 ADL12574.1 ADL12600.1 ADL12600.1 ADL12604.1 ADL12604.1 ADL12630.1 ADL12630.1 ADL12636.1 ADL12636.1 ADL12643.1 ADL12643.1 ADL12644.1 ADL12644.1 ADL12667.1 ADL12667.1 ADL12674.1 ADL12674.1 hfq hfq lexA lexA ADL12701.1 ADL12701.1 ADL12718.1 ADL12718.1 ADL12842.1 ADL12842.1 ADL12863.1 ADL12863.1 ADL12865.1 ADL12865.1 ADL12886.1 ADL12886.1 ADL12947.1 ADL12947.1 ADL13008.1 ADL13008.1 ADL13059.1 ADL13059.1 ADL13068.1 ADL13068.1 nusA nusA ADL13123.1 ADL13123.1 codY codY ADL13196.1 ADL13196.1 ADL13210.1 ADL13210.1 spoIIAB spoIIAB ADL13212.1 ADL13212.1 rex rex ADL13232.1 ADL13232.1 argR argR nusB nusB ADL13285.1 ADL13285.1 ADL13302.1 ADL13302.1 ADL13303.1 ADL13303.1 ADL13308.1 ADL13308.1 ADL13317.1 ADL13317.1 rex-2 rex-2 ADL13319.1 ADL13319.1 ADL13341.1 ADL13341.1 ADL13352.1 ADL13352.1 ADL13357.1 ADL13357.1 ADL13359.1 ADL13359.1 ADL13375.1 ADL13375.1 ADL13389.1 ADL13389.1 ADL13393.1 ADL13393.1 ADL13394.1 ADL13394.1 ADL13395.1 ADL13395.1 ADL13416.1 ADL13416.1 ADL13422.1 ADL13422.1 ADL13427.1 ADL13427.1 ADL13459.1 ADL13459.1 ADL13474.1 ADL13474.1 ADL13480.1 ADL13480.1 ADL13493.1 ADL13493.1 ADL13517.1 ADL13517.1 ADL13523.1 ADL13523.1 ADL13526.1 ADL13526.1 ADL13529.1 ADL13529.1 ADL13541.1 ADL13541.1 ADL13559.1 ADL13559.1 ADL13563.1 ADL13563.1 ADL13586.1 ADL13586.1 ADL13600.1 ADL13600.1 ADL13696.1 ADL13696.1 ADL13739.1 ADL13739.1 ADL13807.1 ADL13807.1 ADL11566.1 ADL11566.1 ADL11602.1 ADL11602.1 ADL11610.1 ADL11610.1 ADL11611.1 ADL11611.1 ADL11634.1 ADL11634.1 ADL11636.1 ADL11636.1 mfd mfd birA birA greA greA ADL11675.1 ADL11675.1 ADL11679.1 ADL11679.1 ADL11697.1 ADL11697.1 nusG nusG ADL11752.1 ADL11752.1 ADL11791.1 ADL11791.1 ADL11795.1 ADL11795.1 ADL11845.1 ADL11845.1 ADL11869.1 ADL11869.1 ADL11870.1 ADL11870.1 ADL11897.1 ADL11897.1 ADL11908.1 ADL11908.1 ADL11930.1 ADL11930.1 ADL11971.1 ADL11971.1 ADL11979.1 ADL11979.1 ADL11987.1 ADL11987.1 ADL12007.1 ADL12007.1 ADL12022.1 ADL12022.1 ADL12029.1 ADL12029.1 ADL12047.1 ADL12047.1 ADL12059.1 ADL12059.1 ADL12073.1 ADL12073.1 ADL12089.1 ADL12089.1 ADL12090.1 ADL12090.1 hrcA hrcA ADL12187.1 ADL12187.1 ADL12195.1 ADL12195.1 ADL12213.1 ADL12213.1 ADL12225.1 ADL12225.1 sigA sigA ADL12240.1 ADL12240.1 ADL12268.1 ADL12268.1 ADL12277.1 ADL12277.1 ADL12295.1 ADL12295.1 ADL12303.1 ADL12303.1 ADL12351.1 ADL12351.1 ADL12384.1 ADL12384.1 ADL12387.1 ADL12387.1 ADL12389.1 ADL12389.1 ADL12395.1 ADL12395.1 ADL12413.1 ADL12413.1 ADL12451.1 ADL12451.1 ADL12453.1 ADL12453.1 ADL12469.1 ADL12469.1 ADL12508.1 ADL12508.1 ADL12538.1 ADL12538.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADL12574.1Transcriptional regulator, CdaR; COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR008599; KEGG: mta:Moth_2351 CdaR family transcriptional regulator; PFAM: sugar diacid recognition domain protein; SPTR: Q2RG03 Transcriptional regulator, CdaR family; PFAM: Putative sugar diacid recognition. (397 aa)
ADL12600.1InterPro IPR005149:IPR011991:IPR003432; KEGG: amt:Amet_2654 PadR-like family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: A6TRI8 Transcriptional regulator, PadR-like family; PFAM: Transcriptional regulator PadR-like family. (128 aa)
ADL12604.13H domain protein; COGs: COG1827 small molecule binding protein (contains 3H domain); InterPro IPR004173:IPR013196:IPR011991; KEGG: cbl:CLK_3150 putative transcriptional regulator; PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; SPTR: B1L1L4 Transcriptional regulator, biotin repressor family; PFAM: HTH domain; 3H domain. (170 aa)
ADL12630.1Cold-shock DNA-binding domain protein; COGs: COG1278 Cold shock protein; InterProIPR011129:IPR019844:IPR016027:IPR002059:IPR 012340; KEGG: hor:Hore_16470 putative cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8CYM7 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain. (110 aa)
ADL12636.1Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR018334:IPR011991; KEGG: hor:Hore_22370 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8D0P6 Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family. (127 aa)
ADL12643.1RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR013325:IPR013324:IPR007627:IPR 013249; KEGG: sth:STH845 RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Q67R63 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. (192 aa)
ADL12644.1Putative transmembrane anti-sigma factor; KEGG: dth:DICTH_0687 hypothetical protein; SPTR: B5YDF1 Putative uncharacterized protein. (186 aa)
ADL12667.1KEGG: hor:Hore_02350 hypothetical protein; SPTR: B8D127 Putative uncharacterized protein. (85 aa)
ADL12674.1RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (273 aa)
hfqRNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (80 aa)
lexASOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (207 aa)
ADL12701.1Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterProIPR000595:IPR001808:IPR012318:IPR018490:IPR 014710:IPR011991; KEGG: tpd:Teth39_2267 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: B0K8F6 Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (227 aa)
ADL12718.1Transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR016032:IPR011991; KEGG: sil:SPO1488 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C7G988 Transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family. (259 aa)
ADL12842.1Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000909:IPR000847:IPR005119:IPR011991; KEGG: drm:Dred_2282 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A4J6T9 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain. (292 aa)
ADL12863.1Putative transcriptional regulator, ModE family; COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR000847:IPR011991; KEGG: mta:Moth_0066 ModE family transcriptional regulator; PFAM: regulatory protein LysR; SPTR: Q2RMD4 Transcriptional regulator, ModE family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain. (112 aa)
ADL12865.1Hypothetical protein; KEGG: sth:STH39 RNA polymerase delta subunit; SPTR: Q67TG9 RNA polymerase delta subunit; PFAM: DNA-directed RNA polymerase delta subunit. (249 aa)
ADL12886.1COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: nth:Nther_0251 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B2A4S8 Response regulator receiver protein; PFAM: Response regulator receiver domain. (119 aa)
ADL12947.1Sun protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. Belongs to the NusB family. (448 aa)
ADL13008.1COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR015424:IPR000524:IPR004839:IPR011991:IPR 015421:IPR015422; KEGG: amt:Amet_3155 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A6TSX6 Putative transcriptional regulator, GntR family; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family. (490 aa)
ADL13059.1Cold-shock DNA-binding domain protein; COGs: COG1278 Cold shock protein; InterProIPR002059:IPR012156:IPR012340:IPR011129:IPR 019844:IPR016027; KEGG: lwe:lwe2036 cold shock-like protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Q71Y04 Cold-shock domain family protein; PFAM: 'Cold-shock' DNA-binding domain. (66 aa)
ADL13068.1RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (275 aa)
nusANusA antitermination factor; Participates in both transcription termination and antitermination. (376 aa)
ADL13123.1RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR000943:IPR014284:IPR012845:IPR011991:IPR 007627:IPR007624:IPR007630:IPR013325:IPR013324; KEGG: hmo:HM1_2251 RNA polymerase sigma factor, FliA/whig family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: B0THD2 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma [...] (260 aa)
codYGTP-sensing pleiotropic transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (264 aa)
ADL13196.1Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterProIPR001647:IPR012287:IPR015893:IPR011075:IPR 009057; KEGG: hmo:HM1_0881 transcriptional regulator, TetR family, putative; PFAM: regulatory protein TetR; SPTR: B0TAN2 Transcriptional regulator, tetr family, putative; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family. (189 aa)
ADL13210.1RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (253 aa)
spoIIABPutative anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (143 aa)
ADL13212.1Anti-sigma-factor antagonist; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658:IPR014237; KEGG: aac:Aaci_1746 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1PTX4 Anti-sigma factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist. (112 aa)
rexCoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (213 aa)
ADL13232.1Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (262 aa)
argRTranscriptional regulator, ArgR family; Regulates arginine biosynthesis genes. (150 aa)
nusBNusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (138 aa)
ADL13285.1Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: hor:Hore_05900 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: B8D2C0 Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Belongs to the Fur family. (142 aa)
ADL13302.1Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: tpd:Teth39_1056 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: C6P894 Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Belongs to the Fur family. (153 aa)
ADL13303.1GntR domain protein; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: mta:Moth_2304 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C0GH87 GntR domain protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (236 aa)
ADL13308.1GntR domain protein; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: amt:Amet_3750 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: A6TUK1 GntR domain protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (245 aa)
ADL13317.1HPr kinase; KEGG: nth:Nther_0094 HPr kinase; SPTR: A7AED5 Putative uncharacterized protein; PFAM: DRTGG domain. (110 aa)
rex-2CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (208 aa)
ADL13319.1DRTGG domain protein; InterPro IPR010766; KEGG: cpy:Cphy_3800 DRTGG domain-containing protein; PFAM: DRTGG domain protein; SPTR: A1HP46 Putative uncharacterized protein; PFAM: DRTGG domain. (113 aa)
ADL13341.1Putative sigma54 specific transcriptional regulator; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR000014:IPR000700:IPR000644:IPR 013785:IPR013767:IPR003593:IPR009057; KEGG: drm:Dred_0399 putative PAS/PAC sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein; CBS domain containing protein; AAA ATPase; SPTR: Q0AWW3 Sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domai [...] (693 aa)
ADL13352.1COGs: COG2909 ATP-dependent transcriptional regulator protein; InterProIPR013026:IPR011990:IPR001440:IPR005158:IPR 019734; KEGG: sth:STH810 transcriptional regulator; PFAM: transcriptional activator domain; TPR repeat-containing protein; SPTR: A6CQL5 Transcriptional regulator; PFAM: Bacterial transcriptional activator domain. (1065 aa)
ADL13357.1Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR009057:IPR011075:IPR012287; KEGG: tte:TTE0070 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q8RDG2 Transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family. (195 aa)
ADL13359.1Hypothetical protein; KEGG: cby:CLM_2227 putative sigma-54 dependent transcriptional regulator; SPTR: B0A7A3 Putative uncharacterized protein. (123 aa)
ADL13375.1InterPro IPR000824:IPR016031; KEGG: hor:Hore_03170 tryptophan RNA-binding attenuator protein; PFAM: tryptophan RNA-binding attenuator protein; SPTR: B8D1K1 Tryptophan RNA-binding attenuator protein; PFAM: Tryptophan RNA-binding attenuator protein. (78 aa)
ADL13389.1Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: hor:Hore_08960 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: B8CWI3 Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Belongs to the Fur family. (132 aa)
ADL13393.1KEGG: hor:Hore_03980 putative transmembrane anti-sigma factor; SPTR: B8D1T0 Putative transmembrane anti-sigma factor. (281 aa)
ADL13394.1Cold-shock DNA-binding protein family; COGs: COG1278 Cold shock protein; InterProIPR019844:IPR002059:IPR016027:IPR012340:IPR 012156:IPR011129; KEGG: hor:Hore_05400 putative cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8D271 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain. (66 aa)
ADL13395.1Cold-shock DNA-binding protein family; COGs: COG1278 Cold shock protein; InterProIPR019844:IPR002059:IPR016027:IPR012340:IPR 012156:IPR011129; KEGG: pjd:Pjdr2_4583 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C6D8L8 Cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain. (66 aa)
ADL13416.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR005829:IPR001789:IPR001867:IPR011006; KEGG: aoe:Clos_0943 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C5RIG3 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (227 aa)
ADL13422.1Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: dhd:Dhaf_0023 transcriptional regulator, TrmB; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: B1B7Z7 Transcriptional regulator, MarR family; PFAM: MarR family. (144 aa)
ADL13427.1Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: tro:trd_A0077 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: B9L5F0 Transcriptional Regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (221 aa)
ADL13459.1Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Q2RHY4 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator). (149 aa)
ADL13474.1Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR015358:IPR009061; KEGG: stl:stu1600 MerR family transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; SPTR: A8CPE1 Putative transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; MerR, DNA binding. (145 aa)
ADL13480.1Cold-shock DNA-binding protein family; COGs: COG1278 Cold shock protein; InterProIPR019844:IPR002059:IPR016027:IPR012340:IPR 012156:IPR011129; KEGG: hor:Hore_16470 putative cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8CYM7 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain. (67 aa)
ADL13493.1Diguanylate cyclase with PAS/PAC sensor; COGs: COG2199 FOG: GGDEF domain; InterProIPR000014:IPR000160:IPR000700:IPR013767:IPR 013655:IPR001610; KEGG: drm:Dred_1552 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A4J4S7 Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (541 aa)
ADL13517.1Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: drm:Dred_0561 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8G158 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (105 aa)
ADL13523.1Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: hor:Hore_20100 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8CZQ5 Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family. (115 aa)
ADL13526.1Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR018334:IPR001845:IPR011991; KEGG: aoe:Clos_1112 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8MGW4 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (104 aa)
ADL13529.1InterPro IPR001845:IPR011991; KEGG: dae:Dtox_2551 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1TEC0 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (99 aa)
ADL13541.1InterPro IPR001845:IPR011991; KEGG: aoe:Clos_0896 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: A8MEW4 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (95 aa)
ADL13559.1TrpR like protein, YerC/YecD; COGs: COG4496 conserved hypothetical protein; InterPro IPR013368:IPR000831:IPR010921; KEGG: hor:Hore_02030 TrpR like protein, YerC/YecD; PFAM: Trp repressor; SPTR: B8D0Z6 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD; trp operon repressor, proteobacterial. (97 aa)
ADL13563.1Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. (622 aa)
ADL13586.1InterPro IPR002145:IPR010985; KEGG: aoe:Clos_2274 CopG family transcriptional regulator; PFAM: CopG domain protein DNA-binding domain protein; SPTR: A8MJ25 Putative transcriptional regulator, CopG family; PFAM: Ribbon-helix-helix protein, copG family. (91 aa)
ADL13600.1InterPro IPR001387:IPR010982; KEGG: tex:Teth514_0702 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B0K4S0 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix. (129 aa)
ADL13696.1InterPro IPR014208; KEGG: hor:Hore_17740 sporulation stage III transcriptional regulator SpoIIID; SPTR: B8CZ04 Sporulation stage III transcriptional regulator SpoIIID; TIGRFAM: sporulation transcriptional regulator SpoIIID; PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID. (86 aa)
ADL13739.1Two component transcriptional regulator, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterProIPR018062:IPR018060:IPR001789:IPR020449:IPR 000005:IPR011006:IPR009057:IPR012287; KEGG: tex:Teth514_0399 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: C6PBQ1 Two component transcriptional regulator, AraC family; PFAM: Response regulator receiver domain; Bacterial regulato [...] (364 aa)
ADL13807.1Hypothetical protein; InterPro IPR020568; KEGG: drm:Dred_3302 endopeptidase La; SPTR: A4J9P9 Endopeptidase La; PFAM: Lon protease (S16) C-terminal proteolytic domain. (63 aa)
ADL11566.1Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR011991; KEGG: hor:Hore_02690 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; SPTR: B8D161 Iron dependent repressor; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain. (161 aa)
ADL11602.1Transcriptional regulator, AbrB family; InterPro IPR007159:IPR006339; KEGG: sth:STH3253 sporulation-related transcriptional regulator AbrB; PFAM: SpoVT/AbrB domain protein; SPTR: Q67JB5 Sporulation-related transcriptional regulator AbrB; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family. (81 aa)
ADL11610.1Protein of unknown function DUF1021; COGs: COG4466 Uncharacterized protein; InterPro IPR009366; KEGG: hor:Hore_21690 hypothetical protein; PFAM: protein of unknown function DUF1021; SPTR: B8D0H9 Uncharacterized protein conserved in bacteria; PFAM: Protein of unknown function (DUF1021). (88 aa)
ADL11611.1Transcriptional regulator, IclR family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: mta:Moth_1180 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C0GIL8 Transcriptional regulator, IclR family; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator. (256 aa)
ADL11634.1Pur operon repressor; COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR015265:IPR000836:IPR011991:IPR010078; KEGG: hor:Hore_21340 purine operon repressor, PurR; PFAM: purine repressor; phosphoribosyltransferase; SPTR: B8D0E3 Purine operon repressor, PurR; TIGRFAM: pur operon repressor; PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; xanthine phosphoribosyltransferase. (275 aa)
ADL11636.1Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: hor:Hore_21300 putative transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: B8D023 Putative transcriptional regulator, MerR family; PFAM: MerR family regulatory protein. (133 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1175 aa)
birAbiotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (331 aa)
greATranscription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (157 aa)
ADL11675.1Protein of unknown function DUF156; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: amt:Amet_1181 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: A6TMH1 Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937. (90 aa)
ADL11679.1Transcriptional repressor, CtsR; COGs: COG4463 Transcriptional repressor of class III stress genes; InterPro IPR008463; KEGG: hor:Hore_00840 transcriptional repressor, CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes; SPTR: B8D091 Transcriptional repressor, CtsR; PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR); Belongs to the CtsR family. (161 aa)
ADL11697.1RNA polymerase, sigma 30 subunit, SigH; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR000792:IPR000943:IPR007627:IPR013249:IPR 011991:IPR013325:IPR013324:IPR014218:IPR014284:IPR016371; KEGG: hor:Hore_01000 sporulation sigma factor SigH; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: B8D0A7 Sporulation sigma factor SigH; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polym [...] (217 aa)
nusGTranscription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. (178 aa)
ADL11752.1Putative transcriptional regulator, GntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839:IPR015421:IPR015422:IPR015424; KEGG: tga:TGAM_1056 multiple substrate aminotransferase; PFAM: aminotransferase class I and II; SPTR: C5A5P6 Multiple substrate aminotransferase; PFAM: Aminotransferase class I and II. (410 aa)
ADL11791.1RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR000943:IPR007627:IPR013249:IPR011991:IPR 013325:IPR013324:IPR014284:IPR016371; KEGG: hor:Hore_16490 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: B8CYM9 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase [...] (222 aa)
ADL11795.1Anti-sigma-28 factor, FlgM; InterPro IPR007412; KEGG: swo:Swol_0190 putative anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor FlgM family protein; SPTR: A1HT59 Anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor, FlgM. (97 aa)
ADL11845.1Protein of unknown function DUF156; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: hor:Hore_13320 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: B8CXR3 Uncharacterized protein conserved in bacteria; PFAM: Uncharacterised BCR, COG1937. (98 aa)
ADL11869.1COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: dae:Dtox_3938 RNA polymerase, sigma 54 subunit, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: A5CYP0 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor. (463 aa)
ADL11870.1Transcriptional regulator, DeoR family; COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007324; KEGG: hor:Hore_15840 transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; SPTR: B8CYG4 Transcriptional regulator, DeoR family; PFAM: Putative sugar-binding domain. (342 aa)
ADL11897.1Putative transcriptional regulator, GntR family; KEGG: hor:Hore_04960 hypothetical protein; SPTR: B8D227 Putative uncharacterized protein; PFAM: UTRA domain. (226 aa)
ADL11908.1COGs: COG0583 Transcriptional regulator; InterPro IPR011991:IPR000847:IPR005119; KEGG: hor:Hore_05450 transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: B8D275 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain. (289 aa)
ADL11930.1Cold-shock DNA-binding protein family; COGs: COG1278 Cold shock protein; InterProIPR012340:IPR019844:IPR002059:IPR016027:IPR 011129:IPR012156; KEGG: hor:Hore_16470 putative cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8CYM7 Putative cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain. (67 aa)
ADL11971.1RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (235 aa)
ADL11979.1Transcriptional regulator, AbrB family; InterPro IPR006339:IPR007159; KEGG: hor:Hore_06360 transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; SPTR: B8D2G6 Transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family. (86 aa)
ADL11987.1PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR009057:IPR000014:IPR003593:IPR 013767:IPR002197; KEGG: amt:Amet_4666 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: A6TX18 Sigma54 specific transcriptional regulator, Fis family; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 i [...] (594 aa)
ADL12007.1Conserved hypothetical protein; InterPro IPR011051; KEGG: rha:RHA1_ro03852 hypothetical protein; SPTR: A8RJL0 Putative uncharacterized protein; PFAM: Cupin domain. (132 aa)
ADL12022.1Putative transcriptional regulator, ModE family; COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR011991:IPR000847; KEGG: nth:Nther_2202 putative transcriptional regulator, ModE family; PFAM: regulatory protein LysR; SPTR: B2A7Z6 Putative transcriptional regulator, ModE family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain. (111 aa)
ADL12029.1Putative sigma54 specific transcriptional regulator; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR000014:IPR003593:IPR013767; KEGG: nth:Nther_0777 putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; SMART: AAA ATPase; PAS domain containing protein; SPTR: B5UK27 Sigma-54 dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: Ribonuclease R winged-helix domain; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS d [...] (728 aa)
ADL12047.1COGs: COG1067 ATP-dependent protease; InterProIPR008268:IPR001984:IPR020568:IPR003593:IPR 014251:IPR003959:IPR008269; KEGG: drm:Dred_2560 ATPase central domain-containing protein; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: AAA ATPase; SPTR: A4J7L7 AAA ATPase, central domain protein; TIGRFAM: ATP-dependent protease LonB; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease. (558 aa)
ADL12059.1Putative sigma54 specific transcriptional regulator; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR002078:IPR000014:IPR003593:IPR013767:IPR 013668; KEGG: nth:Nther_0777 putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; Ribonuclease R winged-helix domain protein; SMART: AAA ATPase; PAS domain containing protein; SPTR: A8VYB9 S-layer domain protein; TIGRFAM: PAS sensor protein; PFAM: Ribonuclease R winged-helix domain; Sigma-54 interaction [...] (687 aa)
ADL12073.1DRTGG domain protein; InterPro IPR010766; KEGG: tex:Teth514_2147 hypothetical protein; PFAM: DRTGG domain protein; SPTR: A1HP46 Putative uncharacterized protein; PFAM: DRTGG domain. (119 aa)
ADL12089.1COGs: COG1522 Transcriptional regulators; InterPro IPR019888; KEGG: amt:Amet_0050 AsnC family transcriptional regulator; SMART: Transcription regulator, AsnC-type; SPTR: A7UGV5 NirD. (155 aa)
ADL12090.1Putative transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019885; KEGG: nth:Nther_1130 putative transcriptional regulator, AsnC family; SPTR: A7UGV6 NirL. (161 aa)
hrcAHeat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (348 aa)
ADL12187.1Sigma-70 region 4 domain protein; InterPro IPR000943:IPR011991:IPR007630; KEGG: conserved hypothetical protein; PFAM: sigma-70 region 4 domain protein; SPTR: C3DG05 Putative uncharacterized protein; PFAM: Sigma-70, region 4. (1154 aa)
ADL12195.1InterPro IPR001387:IPR010982; KEGG: tpd:Teth39_2244 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B7R6E3 Helix-turn-helix domain protein; PFAM: Helix-turn-helix. (131 aa)
ADL12213.1Transcriptional regulator, ArsR family; InterPro IPR001845:IPR011991; KEGG: dsy:DSY3213 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q24SJ0 Putative uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family. (104 aa)
ADL12225.1Putative signal transduction protein with CBS domains; InterPro IPR016842:IPR013196:IPR000644; KEGG: swo:Swol_1514 CBS domain-containing protein; PFAM: CBS domain containing protein; Helix-turn-helix type 11 domain protein; SMART: CBS domain containing protein; SPTR: Q0AWT7 CBS domain protein; PFAM: HTH domain; CBS domain. (216 aa)
sigARNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (358 aa)
ADL12240.1Protein of unknown function DUF28; COGs: COG0217 conserved hypothetical protein; InterPro IPR017856:IPR002876; KEGG: hor:Hore_12350 conserved hypothetical protein TIGR01033; PFAM: protein of unknown function DUF28; SPTR: B8CXG6 UPF0082 protein Hore_12350; PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033. (254 aa)
ADL12268.1Transcriptional regulator, BadM/Rrf2 family; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Q2RHY4 Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator). (153 aa)
ADL12277.1MraZ domain protein; COGs: COG2001 conserved hypothetical protein; InterPro IPR003444:IPR020603; KEGG: hor:Hore_09000 MraZ protein; PFAM: MraZ domain; SPTR: B8CWI7 Protein mraZ; PFAM: MraZ protein. (48 aa)
ADL12295.1RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (247 aa)
ADL12303.1DNA binding domain protein, excisionase family; COGs: COG2452 site-specific integrase-resolvase; InterProIPR006118:IPR006119:IPR000551:IPR009061:IPR 010093; KEGG: lhe:lhv_2923 transposase ORF_A; PFAM: Resolvase domain; regulatory protein MerR; SPTR: A0ZDF6 Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; Resolvase, N terminal domain; TIGRFAM: DNA binding domain, excisionase family. (201 aa)
ADL12351.1Helix-turn-helix type 11 domain protein; COGs: COG2378 transcriptional regulator protein; InterPro IPR018356:IPR001034; KEGG: nth:Nther_0815 helix-turn-helix type 11 domain protein; SPTR: B2A7V3 Helix-turn-helix type 11 domain protein; PFAM: HTH domain. (316 aa)
ADL12384.1RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (260 aa)
ADL12387.1Transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (139 aa)
ADL12389.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: chy:CHY_2047 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: Q3AAG8 DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (235 aa)
ADL12395.1Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: tpd:Teth39_0825 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C6Q3M2 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (233 aa)
ADL12413.1COGs: COG2302 conserved hypothetical protein contains S4-like domain; InterPro IPR002942; KEGG: hor:Hore_09250 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: B8CWL2 RNA-binding S4 domain protein; PFAM: S4 domain. (264 aa)
ADL12451.1Transcriptional regulator, AbrB family; InterPro IPR007159:IPR006339; KEGG: sth:STH3253 sporulation-related transcriptional regulator AbrB; PFAM: SpoVT/AbrB domain protein; SPTR: Q67JB5 Sporulation-related transcriptional regulator AbrB; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family. (81 aa)
ADL12453.1PAS modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterProIPR000014:IPR003593:IPR002078:IPR009057:IPR 013767:IPR002197; KEGG: pth:PTH_0844 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: A5D421 Transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; P [...] (594 aa)
ADL12469.1Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR010982:IPR001761; KEGG: cpo:COPRO5265_1470 catabolite control protein A (glucose-resistance amylase regulator); PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C6Q8U5 Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family. (337 aa)
ADL12508.1GAF modulated sigma54 specific transcriptional regulator, Fis family; COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism; InterProIPR000014:IPR003593:IPR002078:IPR009057:IPR 003018:IPR013767:IPR002197:IPR020441; KEGG: ppd:Ppro_0885 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; SPTR: C6MRV0 GAF modulated sigma54 specific transcriptional regulator, Fis family; TIGRF [...] (651 aa)
ADL12538.1InterPro IPR017275; KEGG: tte:TTE1477 fatty acid biosynthesis transcriptional regulator; SPTR: B7RAH2 Putative uncharacterized protein; PFAM: MaoC like domain. (198 aa)
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
Server load: low (14%) [HD]