STRINGSTRING
I0YJV8_COCSC I0YJV8_COCSC I0YM45_COCSC I0YM45_COCSC I0YR97_COCSC I0YR97_COCSC I0YWN0_COCSC I0YWN0_COCSC I0Z1A0_COCSC I0Z1A0_COCSC I0Z2P4_COCSC I0Z2P4_COCSC I0Z429_COCSC I0Z429_COCSC I0Z5H2_COCSC I0Z5H2_COCSC I0Z6U6_COCSC I0Z6U6_COCSC I0Z6X9_COCSC I0Z6X9_COCSC I0Z7S8_COCSC I0Z7S8_COCSC I0Z8Y8_COCSC I0Z8Y8_COCSC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I0YJV8_COCSCTRASH domain-containing protein. (178 aa)
I0YM45_COCSCRibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (615 aa)
I0YR97_COCSCLow-CO2-inducible protein. (260 aa)
I0YWN0_COCSCRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (243 aa)
I0Z1A0_COCSCBrix-domain-containing protein. (317 aa)
I0Z2P4_COCSCRNA-binding domain-containing protein. (180 aa)
I0Z429_COCSC60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (179 aa)
I0Z5H2_COCSCRibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (442 aa)
I0Z6U6_COCSCBrix-domain-containing protein. (299 aa)
I0Z6X9_COCSCPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (582 aa)
I0Z7S8_COCSCRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (428 aa)
I0Z8Y8_COCSCRibosomal protein L1. (261 aa)
Your Current Organism:
Coccomyxa subellipsoidea
NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169
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