5 items (Coccomyxa subellipsoidea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I0YIX6_COCSC	Photosystem II stability/assembly factor HCF136. (301 aa)
	I0YM09_COCSC	Uncharacterized protein. (200 aa)
	I0YV71_COCSC	PsaB RNA binding protein. (304 aa)
	I0Z1T8_COCSC	DUF1995 domain-containing protein. (394 aa)
	I0Z499_COCSC	Peptidylprolyl isomerase. (94 aa)

Your Current Organism:

Coccomyxa subellipsoidea

NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I0YIX6_COCSC	I0YM09_COCSC	I0YIX6	I0YM09	Photosystem II stability/assembly factor HCF136.	Uncharacterized protein.	0.406
I0YIX6_COCSC	I0YV71_COCSC	I0YIX6	I0YV71	Photosystem II stability/assembly factor HCF136.	PsaB RNA binding protein.	0.503
I0YM09_COCSC	I0YIX6_COCSC	I0YM09	I0YIX6	Uncharacterized protein.	Photosystem II stability/assembly factor HCF136.	0.406
I0YM09_COCSC	I0YV71_COCSC	I0YM09	I0YV71	Uncharacterized protein.	PsaB RNA binding protein.	0.434
I0YM09_COCSC	I0Z499_COCSC	I0YM09	I0Z499	Uncharacterized protein.	Peptidylprolyl isomerase.	0.547
I0YV71_COCSC	I0YIX6_COCSC	I0YV71	I0YIX6	PsaB RNA binding protein.	Photosystem II stability/assembly factor HCF136.	0.503
I0YV71_COCSC	I0YM09_COCSC	I0YV71	I0YM09	PsaB RNA binding protein.	Uncharacterized protein.	0.434
I0YV71_COCSC	I0Z1T8_COCSC	I0YV71	I0Z1T8	PsaB RNA binding protein.	DUF1995 domain-containing protein.	0.417
I0Z1T8_COCSC	I0YV71_COCSC	I0Z1T8	I0YV71	DUF1995 domain-containing protein.	PsaB RNA binding protein.	0.417
I0Z499_COCSC	I0YM09_COCSC	I0Z499	I0YM09	Peptidylprolyl isomerase.	Uncharacterized protein.	0.547