19 items (Coccomyxa subellipsoidea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I0YSD0_COCSC	Uncharacterized protein. (64 aa)
	I0YXV9_COCSC	WD40 repeat-like protein. (388 aa)
	I0YZ82_COCSC	Small nucleolar ribonucleo protein U3 component. (182 aa)
	I0Z496_COCSC	Nop-domain-containing protein. (554 aa)
	I0Z4E8_COCSC	WD40 repeat-like protein. (820 aa)
	I0Z4V6_COCSC	DUF663-domain-containing protein. (607 aa)
	I0Z784_COCSC	BP28CT domain-containing protein. (2078 aa)
	I0Z8E0_COCSC	Brix-domain-containing protein. (297 aa)
	I0Z9Q1_COCSC	Uncharacterized protein. (594 aa)
	I0ZA49_COCSC	WD40 repeat-like protein. (352 aa)
	I0ZA68_COCSC	Nop14-like protein. (983 aa)
	I0YN10_COCSC	51.6 kd-like protein. (376 aa)
	I0YN13_COCSC	Bystin-domain-containing protein. (170 aa)
	I0YPS9_COCSC	DUF1253-domain-containing protein. (470 aa)
	I0YPT0_COCSC	DUF663-domain-containing protein. (1232 aa)
	I0YQ94_COCSC	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (199 aa)
	I0YRS0_COCSC	Nop-domain-containing protein. (558 aa)
	I0YRV4_COCSC	Transducin family protein. (904 aa)
	I0YUP9_COCSC	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (282 aa)

Your Current Organism:

Coccomyxa subellipsoidea

NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I0YN10_COCSC	I0YPS9_COCSC	I0YN10	I0YPS9	51.6 kd-like protein.	DUF1253-domain-containing protein.	0.674
I0YN10_COCSC	I0YPT0_COCSC	I0YN10	I0YPT0	51.6 kd-like protein.	DUF663-domain-containing protein.	0.962
I0YN10_COCSC	I0YRS0_COCSC	I0YN10	I0YRS0	51.6 kd-like protein.	Nop-domain-containing protein.	0.922
I0YN10_COCSC	I0YRV4_COCSC	I0YN10	I0YRV4	51.6 kd-like protein.	Transducin family protein.	0.953
I0YN10_COCSC	I0YUP9_COCSC	I0YN10	I0YUP9	51.6 kd-like protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.793
I0YN10_COCSC	I0YXV9_COCSC	I0YN10	I0YXV9	51.6 kd-like protein.	WD40 repeat-like protein.	0.850
I0YN10_COCSC	I0YZ82_COCSC	I0YN10	I0YZ82	51.6 kd-like protein.	Small nucleolar ribonucleo protein U3 component.	0.941
I0YN10_COCSC	I0Z496_COCSC	I0YN10	I0Z496	51.6 kd-like protein.	Nop-domain-containing protein.	0.935
I0YN10_COCSC	I0Z4E8_COCSC	I0YN10	I0Z4E8	51.6 kd-like protein.	WD40 repeat-like protein.	0.850
I0YN10_COCSC	I0Z4V6_COCSC	I0YN10	I0Z4V6	51.6 kd-like protein.	DUF663-domain-containing protein.	0.987
I0YN10_COCSC	I0Z784_COCSC	I0YN10	I0Z784	51.6 kd-like protein.	BP28CT domain-containing protein.	0.887
I0YN10_COCSC	I0Z8E0_COCSC	I0YN10	I0Z8E0	51.6 kd-like protein.	Brix-domain-containing protein.	0.939
I0YN10_COCSC	I0Z9Q1_COCSC	I0YN10	I0Z9Q1	51.6 kd-like protein.	Uncharacterized protein.	0.940
I0YN10_COCSC	I0ZA49_COCSC	I0YN10	I0ZA49	51.6 kd-like protein.	WD40 repeat-like protein.	0.956
I0YN10_COCSC	I0ZA68_COCSC	I0YN10	I0ZA68	51.6 kd-like protein.	Nop14-like protein.	0.959
I0YN13_COCSC	I0YPS9_COCSC	I0YN13	I0YPS9	Bystin-domain-containing protein.	DUF1253-domain-containing protein.	0.674
I0YN13_COCSC	I0YPT0_COCSC	I0YN13	I0YPT0	Bystin-domain-containing protein.	DUF663-domain-containing protein.	0.962
I0YN13_COCSC	I0YRS0_COCSC	I0YN13	I0YRS0	Bystin-domain-containing protein.	Nop-domain-containing protein.	0.922
I0YN13_COCSC	I0YRV4_COCSC	I0YN13	I0YRV4	Bystin-domain-containing protein.	Transducin family protein.	0.953
I0YN13_COCSC	I0YUP9_COCSC	I0YN13	I0YUP9	Bystin-domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.793