24 items (Coccomyxa subellipsoidea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I0YZQ7_COCSC	ARM repeat-containing protein. (2946 aa)
	I0Z275_COCSC	RWP-RK domain-containing protein. (779 aa)
	I0Z8E0_COCSC	Brix-domain-containing protein. (297 aa)
	I0Z8Y8_COCSC	Ribosomal protein L1. (261 aa)
	I0YJP9_COCSC	DUF947-domain-containing protein. (194 aa)
	I0YY54_COCSC	CBF-domain-containing protein. (960 aa)
	I0Z9Q1_COCSC	Uncharacterized protein. (594 aa)
	I0Z9Y2_COCSC	Uncharacterized protein. (198 aa)
	I0ZA68_COCSC	Nop14-like protein. (983 aa)
	I0Z784_COCSC	BP28CT domain-containing protein. (2078 aa)
	I0YZ82_COCSC	Small nucleolar ribonucleo protein U3 component. (182 aa)
	I0Z3T5_COCSC	Kri1_C domain-containing protein. (687 aa)
	I0Z4E8_COCSC	WD40 repeat-like protein. (820 aa)
	I0Z6X9_COCSC	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (582 aa)
	I0YXV9_COCSC	WD40 repeat-like protein. (388 aa)
	I0YWI3_COCSC	WD40 repeat-like protein. (421 aa)
	I0YU81_COCSC	WD40 repeat-like protein. (904 aa)
	I0YT93_COCSC	RRM domain-containing protein. (251 aa)
	I0YRV4_COCSC	Transducin family protein. (904 aa)
	I0YQ72_COCSC	Mpp10-domain-containing protein. (136 aa)
	I0YPT0_COCSC	DUF663-domain-containing protein. (1232 aa)
	I0YNR9_COCSC	Uncharacterized protein. (858 aa)
	I0YM64_COCSC	WD40 repeat-like protein. (890 aa)
	I0YM45_COCSC	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (615 aa)

Your Current Organism:

Coccomyxa subellipsoidea

NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I0YJP9_COCSC	I0YM64_COCSC	I0YJP9	I0YM64	DUF947-domain-containing protein.	WD40 repeat-like protein.	0.694
I0YJP9_COCSC	I0YNR9_COCSC	I0YJP9	I0YNR9	DUF947-domain-containing protein.	Uncharacterized protein.	0.410
I0YJP9_COCSC	I0YPT0_COCSC	I0YJP9	I0YPT0	DUF947-domain-containing protein.	DUF663-domain-containing protein.	0.825
I0YJP9_COCSC	I0YQ72_COCSC	I0YJP9	I0YQ72	DUF947-domain-containing protein.	Mpp10-domain-containing protein.	0.727
I0YJP9_COCSC	I0YRV4_COCSC	I0YJP9	I0YRV4	DUF947-domain-containing protein.	Transducin family protein.	0.678
I0YJP9_COCSC	I0YT93_COCSC	I0YJP9	I0YT93	DUF947-domain-containing protein.	RRM domain-containing protein.	0.955
I0YJP9_COCSC	I0YU81_COCSC	I0YJP9	I0YU81	DUF947-domain-containing protein.	WD40 repeat-like protein.	0.673
I0YJP9_COCSC	I0YWI3_COCSC	I0YJP9	I0YWI3	DUF947-domain-containing protein.	WD40 repeat-like protein.	0.978
I0YJP9_COCSC	I0YXV9_COCSC	I0YJP9	I0YXV9	DUF947-domain-containing protein.	WD40 repeat-like protein.	0.612
I0YJP9_COCSC	I0YY54_COCSC	I0YJP9	I0YY54	DUF947-domain-containing protein.	CBF-domain-containing protein.	0.823
I0YJP9_COCSC	I0YZ82_COCSC	I0YJP9	I0YZ82	DUF947-domain-containing protein.	Small nucleolar ribonucleo protein U3 component.	0.777
I0YJP9_COCSC	I0YZQ7_COCSC	I0YJP9	I0YZQ7	DUF947-domain-containing protein.	ARM repeat-containing protein.	0.816
I0YJP9_COCSC	I0Z4E8_COCSC	I0YJP9	I0Z4E8	DUF947-domain-containing protein.	WD40 repeat-like protein.	0.612
I0YJP9_COCSC	I0Z6X9_COCSC	I0YJP9	I0Z6X9	DUF947-domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.518
I0YJP9_COCSC	I0Z784_COCSC	I0YJP9	I0Z784	DUF947-domain-containing protein.	BP28CT domain-containing protein.	0.843
I0YJP9_COCSC	I0Z8E0_COCSC	I0YJP9	I0Z8E0	DUF947-domain-containing protein.	Brix-domain-containing protein.	0.743
I0YJP9_COCSC	I0Z9Q1_COCSC	I0YJP9	I0Z9Q1	DUF947-domain-containing protein.	Uncharacterized protein.	0.980
I0YJP9_COCSC	I0ZA68_COCSC	I0YJP9	I0ZA68	DUF947-domain-containing protein.	Nop14-like protein.	0.855
I0YM45_COCSC	I0YM64_COCSC	I0YM45	I0YM64	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	WD40 repeat-like protein.	0.879
I0YM45_COCSC	I0YNR9_COCSC	I0YM45	I0YNR9	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	Uncharacterized protein.	0.815