14 items (Coccomyxa subellipsoidea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I0Z9B4_COCSC	LIPOYLtransferase 2. (210 aa)
	I0Z723_COCSC	Fibrillarin. (244 aa)
	I0Z5L3_COCSC	NAF1-domain-containing protein. (575 aa)
	I0Z496_COCSC	Nop-domain-containing protein. (554 aa)
	I0Z1Y1_COCSC	Uncharacterized protein. (129 aa)
	I0YUP9_COCSC	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (282 aa)
	I0YTI2_COCSC	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	I0YSD0_COCSC	Uncharacterized protein. (64 aa)
	I0YRS0_COCSC	Nop-domain-containing protein. (558 aa)
	I0YRA5_COCSC	Alba-domain-containing protein. (176 aa)
	I0YQI1_COCSC	Putative tRNA pseudouridine synthase. (235 aa)
	I0YQ94_COCSC	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (199 aa)
	I0YNH8_COCSC	Putative rRNA pseudouridine synthase. (392 aa)
	I0YM89_COCSC	POPLD domain-containing protein. (224 aa)

Your Current Organism:

Coccomyxa subellipsoidea

NCBI taxonomy Id: 574566
Other names: C. subellipsoidea C-169, Chlorella vulgaris C-169, Coccomyxa sp. C-169, Coccomyxa subellipsoidea C-169

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I0YM89_COCSC	I0YRA5_COCSC	I0YM89	I0YRA5	POPLD domain-containing protein.	Alba-domain-containing protein.	0.838
I0YM89_COCSC	I0YRS0_COCSC	I0YM89	I0YRS0	POPLD domain-containing protein.	Nop-domain-containing protein.	0.404
I0YM89_COCSC	I0YTI2_COCSC	I0YM89	I0YTI2	POPLD domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.619
I0YM89_COCSC	I0Z1Y1_COCSC	I0YM89	I0Z1Y1	POPLD domain-containing protein.	Uncharacterized protein.	0.425
I0YM89_COCSC	I0Z5L3_COCSC	I0YM89	I0Z5L3	POPLD domain-containing protein.	NAF1-domain-containing protein.	0.480
I0YNH8_COCSC	I0YQ94_COCSC	I0YNH8	I0YQ94	Putative rRNA pseudouridine synthase.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.970
I0YNH8_COCSC	I0YRS0_COCSC	I0YNH8	I0YRS0	Putative rRNA pseudouridine synthase.	Nop-domain-containing protein.	0.955
I0YNH8_COCSC	I0YSD0_COCSC	I0YNH8	I0YSD0	Putative rRNA pseudouridine synthase.	Uncharacterized protein.	0.972
I0YNH8_COCSC	I0YTI2_COCSC	I0YNH8	I0YTI2	Putative rRNA pseudouridine synthase.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.921
I0YNH8_COCSC	I0YUP9_COCSC	I0YNH8	I0YUP9	Putative rRNA pseudouridine synthase.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.982
I0YNH8_COCSC	I0Z496_COCSC	I0YNH8	I0Z496	Putative rRNA pseudouridine synthase.	Nop-domain-containing protein.	0.944
I0YNH8_COCSC	I0Z5L3_COCSC	I0YNH8	I0Z5L3	Putative rRNA pseudouridine synthase.	NAF1-domain-containing protein.	0.855
I0YNH8_COCSC	I0Z723_COCSC	I0YNH8	I0Z723	Putative rRNA pseudouridine synthase.	Fibrillarin.	0.947
I0YQ94_COCSC	I0YNH8_COCSC	I0YQ94	I0YNH8	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Putative rRNA pseudouridine synthase.	0.970
I0YQ94_COCSC	I0YQI1_COCSC	I0YQ94	I0YQI1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Putative tRNA pseudouridine synthase.	0.970
I0YQ94_COCSC	I0YRS0_COCSC	I0YQ94	I0YRS0	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nop-domain-containing protein.	0.908
I0YQ94_COCSC	I0YSD0_COCSC	I0YQ94	I0YSD0	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.994
I0YQ94_COCSC	I0YTI2_COCSC	I0YQ94	I0YTI2	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.928
I0YQ94_COCSC	I0YUP9_COCSC	I0YQ94	I0YUP9	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.998
I0YQ94_COCSC	I0Z496_COCSC	I0YQ94	I0Z496	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nop-domain-containing protein.	0.931