(40 nodes) Mixed, incl. Aldehyde oxidase/xanthine dehydrogenase, second molybdopterin binding domain, and [2Fe-2S]-binding network (Bradyrhizobium sp. AT1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KYG24749.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (790 aa)
	KYG20304.1	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)
	KYG20305.1	XdhC/CoxF family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	KYG20306.1	XdhC/CoxI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
	KYG20307.1	Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	KYG20308.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
	KYG20309.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
	KYG20310.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
	KYG20311.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
	KYG20590.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	KYG20591.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	KYG20592.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (797 aa)
	KYG24959.1	Dihydroorotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
	KYG20643.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	KYG24968.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
	KYG21323.1	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
	KYG21324.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (728 aa)
	KYG21598.1	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (763 aa)
	KYG21599.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
	KYG21600.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	KYG21601.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	KYG21797.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (753 aa)
	KYG21798.1	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
	KYG21799.1	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
	KYG21872.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (774 aa)
	KYG22533.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
	KYG22534.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (780 aa)
	KYG22535.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	KYG23001.1	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
	KYG23002.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (764 aa)
	KYG24374.1	Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	KYG25450.1	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	KYG24416.1	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
	KYG24417.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (791 aa)
	KYG24434.1	Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (770 aa)
	KYG25452.1	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
	KYG24483.1	Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (907 aa)
	KYG24484.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	KYG25458.1	8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	KYG24655.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (769 aa)

Your Current Organism:

Bradyrhizobium sp. AT1

NCBI taxonomy Id: 574934
Other names: B. sp. AT1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KYG20304.1	KYG20305.1	SE92_08540	SE92_08545	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	XdhC/CoxF family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KYG20304.1	KYG20306.1	SE92_08540	SE92_08550	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	XdhC/CoxI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KYG20304.1	KYG20307.1	SE92_08540	SE92_08555	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
KYG20304.1	KYG20308.1	SE92_08540	SE92_08560	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.662
KYG20304.1	KYG20309.1	SE92_08540	SE92_08565	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
KYG20304.1	KYG20310.1	SE92_08540	SE92_08570	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
KYG20304.1	KYG20311.1	SE92_08540	SE92_08575	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
KYG20304.1	KYG20590.1	SE92_08540	SE92_10210	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
KYG20304.1	KYG20591.1	SE92_08540	SE92_10215	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
KYG20304.1	KYG20592.1	SE92_08540	SE92_10220	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
KYG20304.1	KYG20643.1	SE92_08540	SE92_10525	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
KYG20304.1	KYG21323.1	SE92_08540	SE92_14455	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KYG20304.1	KYG21324.1	SE92_08540	SE92_14460	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
KYG20304.1	KYG21598.1	SE92_08540	SE92_16135	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.521
KYG20304.1	KYG21599.1	SE92_08540	SE92_16140	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
KYG20304.1	KYG21600.1	SE92_08540	SE92_16145	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
KYG20304.1	KYG21601.1	SE92_08540	SE92_16150	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
KYG20304.1	KYG21797.1	SE92_08540	SE92_17365	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
KYG20304.1	KYG21798.1	SE92_08540	SE92_17370	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.614
KYG20304.1	KYG21799.1	SE92_08540	SE92_17375	4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538