(36 nodes) Mixed, incl. Dilute domain, and Alfin network (Trifolium pratense)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	L195_g048895	PHD finger protein alfin-like 5-like. (137 aa)
	L195_g050871	Putative membrane protein. (37 aa)
	L195_g052500	Myosin-H heavy chain-like protein. (202 aa)
	L195_g052590	WRKY transcription factor. (146 aa)
	L195_g062048	PHD finger protein alfin1-like. (83 aa)
	L195_g054487	Myosin-H heavy chain-like protein. (103 aa)
	L195_g028012	Dof zinc finger protein. (66 aa)
	L195_g028233	PHD finger protein alfin-like 1-like. (178 aa)
	L195_g029850	Ethylene-responsive transcription factor rap2-1-like protein. (163 aa)
	L195_g030170	Thylakoid membrane phosphoprotein 14 chloroplastic-like. (86 aa)
	L195_g031687	Pyridoxamine 5'-phosphate oxidase family protein. (189 aa)
	L195_g026072	Dof zinc finger protein. (341 aa)
	L195_g032610	PHD finger protein alfin-like 4-like. (165 aa)
	L195_g033811	Dof zinc finger protein. (298 aa)
	L195_g037648	Ethylene-responsive transcription factor erf113-like protein. (187 aa)
	L195_g039455	Myosin-H heavy chain-like protein. (157 aa)
	L195_g041167	Ap2-like ethylene-responsive transcription factor ant-like protein. (94 aa)
	L195_g041662	Myosin-H heavy chain-like protein. (115 aa)
	L195_g042083	DNA binding protein. (137 aa)
	L195_g042109	Dof zinc finger protein. (270 aa)
	L195_g042260	Magnesium transporter MRS2-i-like protein. (132 aa)
	L195_g043106	Myosin-H heavy chain-like protein. (63 aa)
	L195_g043689	Prolyl 4-hydroxylase subunit alpha-1-like protein. (80 aa)
	L195_g015237	Ethylene-responsive transcription factor erf098-like protein. (131 aa)
	L195_g016433	Uncharacterized protein. (268 aa)
	L195_g017210	Ethylene-responsive transcription factor erf008-like protein. (180 aa)
	L195_g018171	Ethylene-responsive transcription factor rap2-1-like protein. (137 aa)
	L195_g021700	Chaperone dnaJ-like protein. (333 aa)
	L195_g023796	Magnesium transporter MRS2-2-like protein. (110 aa)
	L195_g026233	Dof zinc finger protein. (369 aa)
	L195_g005316	Amino acid binding protein. (146 aa)
	L195_g005536	Protein kinase domain-containing protein. (594 aa)
	L195_g009220	Ethylene-responsive transcription factor abr1-like protein. (323 aa)
	L195_g009760	Uncharacterized protein. (271 aa)
	L195_g012712	Myosin-H heavy chain-like protein. (178 aa)
	L195_g012790	Dof zinc finger protein. (295 aa)

Your Current Organism:

Trifolium pratense

NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L195_g005316	L195_g005536	A0A2K3P0G3	A0A2K3P128	Amino acid binding protein.	Protein kinase domain-containing protein.	0.449
L195_g005316	L195_g009220	A0A2K3P0G3	A0A2K3PBC8	Amino acid binding protein.	Ethylene-responsive transcription factor abr1-like protein.	0.461
L195_g005316	L195_g009760	A0A2K3P0G3	A0A2K3PCW4	Amino acid binding protein.	Uncharacterized protein.	0.492
L195_g005316	L195_g012712	A0A2K3P0G3	A0A2K3PL51	Amino acid binding protein.	Myosin-H heavy chain-like protein.	0.495
L195_g005316	L195_g012790	A0A2K3P0G3	A0A2K3PLD6	Amino acid binding protein.	Dof zinc finger protein.	0.506
L195_g005316	L195_g015237	A0A2K3P0G3	A0A2K3MMW3	Amino acid binding protein.	Ethylene-responsive transcription factor erf098-like protein.	0.514
L195_g005316	L195_g016433	A0A2K3P0G3	A0A2K3MRA4	Amino acid binding protein.	Uncharacterized protein.	0.492
L195_g005316	L195_g017210	A0A2K3P0G3	A0A2K3MTI9	Amino acid binding protein.	Ethylene-responsive transcription factor erf008-like protein.	0.474
L195_g005316	L195_g018171	A0A2K3P0G3	A0A2K3MW93	Amino acid binding protein.	Ethylene-responsive transcription factor rap2-1-like protein.	0.516
L195_g005316	L195_g021700	A0A2K3P0G3	A0A2K3N5Z4	Amino acid binding protein.	Chaperone dnaJ-like protein.	0.530
L195_g005316	L195_g023796	A0A2K3P0G3	A0A2K3NBU9	Amino acid binding protein.	Magnesium transporter MRS2-2-like protein.	0.495
L195_g005316	L195_g026072	A0A2K3P0G3	A0A2K3LCX5	Amino acid binding protein.	Dof zinc finger protein.	0.471
L195_g005316	L195_g026233	A0A2K3P0G3	A0A2K3NIM8	Amino acid binding protein.	Dof zinc finger protein.	0.401
L195_g005316	L195_g028012	A0A2K3P0G3	A0A2K3L0S4	Amino acid binding protein.	Dof zinc finger protein.	0.521
L195_g005316	L195_g028233	A0A2K3P0G3	A0A2K3L1E4	Amino acid binding protein.	PHD finger protein alfin-like 1-like.	0.523
L195_g005316	L195_g029850	A0A2K3P0G3	A0A2K3L601	Amino acid binding protein.	Ethylene-responsive transcription factor rap2-1-like protein.	0.516
L195_g005316	L195_g030170	A0A2K3P0G3	A0A2K3L6U2	Amino acid binding protein.	Thylakoid membrane phosphoprotein 14 chloroplastic-like.	0.433
L195_g005316	L195_g031687	A0A2K3P0G3	A0A2K3LB50	Amino acid binding protein.	Pyridoxamine 5'-phosphate oxidase family protein.	0.502
L195_g005316	L195_g032610	A0A2K3P0G3	A0A2K3LDN3	Amino acid binding protein.	PHD finger protein alfin-like 4-like.	0.535
L195_g005316	L195_g033811	A0A2K3P0G3	A0A2K3LH36	Amino acid binding protein.	Dof zinc finger protein.	0.450