Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VS_0030 | VS_0031 | VS_0030 | VS_0031 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | DNA-binding response regulator in two-component regulatory system with PhoQ, PhoP; Function of homologous gene experimentally demonstrated in another organism; regulator. | 0.962 |
| VS_0030 | VS_0086 | VS_0030 | VS_0086 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Sensory box/GGDEF family protein. | 0.719 |
| VS_0030 | VS_0117 | VS_0030 | VS_0117 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | GGDEF family protein. | 0.795 |
| VS_0030 | VS_0156 | VS_0030 | VS_0156 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Transcriptional regulatory protein ompR. | 0.607 |
| VS_0030 | VS_0476 | VS_0030 | VS_0476 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Sensory box/GGDEF family protein. | 0.788 |
| VS_0030 | VS_0477 | VS_0030 | VS_0477 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Aerobic respiration control sensor protein ArcB. | 0.975 |
| VS_0030 | VS_0479 | VS_0030 | VS_0479 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Aerobic respiration control protein arcA. | 0.625 |
| VS_0030 | VS_0579 | VS_0030 | VS_0579 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | DNA-binding response regulator PhoB. | 0.650 |
| VS_0030 | VS_0580 | VS_0030 | VS_0580 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Histidine protein kinase PhoR. | 0.512 |
| VS_0030 | VS_0625 | VS_0030 | VS_0625 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | GGDEF family protein. | 0.764 |
| VS_0030 | VS_0701 | VS_0030 | VS_0701 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Response regulator. | 0.443 |
| VS_0030 | VS_0799 | VS_0030 | VS_0799 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Chemotaxis signal transduction protein. | 0.547 |
| VS_0030 | VS_0841 | VS_0030 | VS_0841 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Chemotaxis protein CheY. | 0.433 |
| VS_0030 | VS_0910 | VS_0030 | VS_0910 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Response regulator. | 0.445 |
| VS_0030 | VS_0964 | VS_0030 | VS_0964 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Sensory box histidine kinase/response regulator. | 0.866 |
| VS_0030 | VS_0996 | VS_0030 | VS_0996 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Sensory box/GGDEF family protein. | 0.477 |
| VS_0030 | VS_1039 | VS_0030 | VS_1039 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Chemotaxis protein. | 0.547 |
| VS_0030 | VS_1129 | VS_0030 | VS_1129 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Signal transduction histidine kinase. | 0.802 |
| VS_0030 | VS_1155 | VS_0030 | VS_1155 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Sensory box histidine kinase/response regulator. | 0.865 |
| VS_0030 | VS_1156 | VS_0030 | VS_1156 | Putative sensor protein phoQ,membrane-associated histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.482 |
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