(12 nodes) Mixed, incl. CheW-like domain, and Chemotaxis network (Vibrio tasmaniensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VS_0799	Chemotaxis signal transduction protein. (308 aa)
	VS_0800	Methylase of chemotaxis methyl-accepting protein CheR. (275 aa)
	VS_0841	Chemotaxis protein CheY. (122 aa)
	VS_0842	Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (203 aa)
	VS_0843	Chemotaxis protein cheA. (733 aa)
	cheB	Chemotaxis protein CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (374 aa)
	VS_0846	Conserved hypothetical protein. (389 aa)
	VS_0965	Hypothetical protein. (458 aa)
	VS_1039	Chemotaxis protein. (313 aa)
	VS_1097	Methyl-accepting chemotaxis protein. (630 aa)
	VS_II0293	Chemotaxis protein. (304 aa)
	VS_II1056	Methyl-accepting chemotaxis protein. (520 aa)

Your Current Organism:

Vibrio tasmaniensis

NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VS_0799	VS_0800	VS_0799	VS_0800	Chemotaxis signal transduction protein.	Methylase of chemotaxis methyl-accepting protein CheR.	0.996
VS_0799	VS_0841	VS_0799	VS_0841	Chemotaxis signal transduction protein.	Chemotaxis protein CheY.	0.895
VS_0799	VS_0842	VS_0799	VS_0842	Chemotaxis signal transduction protein.	Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).	0.991
VS_0799	VS_0843	VS_0799	VS_0843	Chemotaxis signal transduction protein.	Chemotaxis protein cheA.	0.999
VS_0799	VS_0846	VS_0799	VS_0846	Chemotaxis signal transduction protein.	Conserved hypothetical protein.	0.943
VS_0799	VS_0965	VS_0799	VS_0965	Chemotaxis signal transduction protein.	Hypothetical protein.	0.940
VS_0799	VS_1039	VS_0799	VS_1039	Chemotaxis signal transduction protein.	Chemotaxis protein.	0.946
VS_0799	VS_1097	VS_0799	VS_1097	Chemotaxis signal transduction protein.	Methyl-accepting chemotaxis protein.	0.997
VS_0799	VS_II0293	VS_0799	VS_II0293	Chemotaxis signal transduction protein.	Chemotaxis protein.	0.956
VS_0799	VS_II1056	VS_0799	VS_II1056	Chemotaxis signal transduction protein.	Methyl-accepting chemotaxis protein.	0.999
VS_0799	cheB	VS_0799	VS_0844	Chemotaxis signal transduction protein.	Chemotaxis protein CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.	0.996
VS_0800	VS_0799	VS_0800	VS_0799	Methylase of chemotaxis methyl-accepting protein CheR.	Chemotaxis signal transduction protein.	0.996
VS_0800	VS_0841	VS_0800	VS_0841	Methylase of chemotaxis methyl-accepting protein CheR.	Chemotaxis protein CheY.	0.937
VS_0800	VS_0842	VS_0800	VS_0842	Methylase of chemotaxis methyl-accepting protein CheR.	Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).	0.895
VS_0800	VS_0843	VS_0800	VS_0843	Methylase of chemotaxis methyl-accepting protein CheR.	Chemotaxis protein cheA.	0.989
VS_0800	VS_0846	VS_0800	VS_0846	Methylase of chemotaxis methyl-accepting protein CheR.	Conserved hypothetical protein.	0.837
VS_0800	VS_0965	VS_0800	VS_0965	Methylase of chemotaxis methyl-accepting protein CheR.	Hypothetical protein.	0.896
VS_0800	VS_1039	VS_0800	VS_1039	Methylase of chemotaxis methyl-accepting protein CheR.	Chemotaxis protein.	0.986
VS_0800	VS_1097	VS_0800	VS_1097	Methylase of chemotaxis methyl-accepting protein CheR.	Methyl-accepting chemotaxis protein.	0.969
VS_0800	VS_II0293	VS_0800	VS_II0293	Methylase of chemotaxis methyl-accepting protein CheR.	Chemotaxis protein.	0.986