23 items (Vibrio tasmaniensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	viuP	ABC transporter: Substrate-binding protein precursor (BP); Function of homologous gene experimentally demonstrated in another organism; transporter. (295 aa)
	viuD	ABC transporter: Transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (346 aa)
	viuG	ABC transporter: permease protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (353 aa)
	viuC	ABC transporter: ATP-binding protein; Function of homologous gene experimentally demonstrated in another organism; transporter. (270 aa)
	VS_2112	Ferrichrome transport ATP-binding protein fhuC. (255 aa)
	VS_2113	ABC-type hydroxamate-dependent iron transport system, periplasmic component. (297 aa)
	VS_2114	Iron transport system; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (665 aa)
	hmuV	Hemin ABC transporter, ATP-binding protein HutD; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (260 aa)
	VS_II0285	Hemin transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)
	VS_II0286	Hemin ABC transporter, periplasmic hemin-binding protein HutB. (296 aa)
	VS_II0498	ABC transporter: ATP-binding protein. (261 aa)
	VS_II0501	ABC transporter: TonB-dependant outer membrane receptor precursor. (709 aa)
	VS_II0502	ABC transporter: Substrate binding protein precursor. (316 aa)
	VS_II0503	ABC transporter: ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (664 aa)
	VS_II1067	ABC transporter, ATP-binding protein; Function of homologous gene experimentally demonstrated in another organism; transporter. (254 aa)
	VS_II1068	ABC transporter, transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (316 aa)
	VS_II1070	ABC transporter, transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (317 aa)
	VS_II1071	ABC transporter, periplasmic susbtrate binding protein; Function of homologous gene experimentally demonstrated in another organism; transporter. (321 aa)
	VS_II1123	ABC transporter: ATP-binding protein; Function of homologous gene experimentally demonstrated in another organism; transporter. (257 aa)
	VS_II1124	ABC transporter: transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (334 aa)
	VS_II1125	ABC transporter: transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (368 aa)
	VS_II1126	ABC transporter: substrate-binding protein;vibrioferrin uptake; Function of homologous gene experimentally demonstrated in another organism; transporter. (325 aa)
	VS_II1127	Vibrioferrin receptor; Function of homologous gene experimentally demonstrated in another organism; transporter. (707 aa)

Your Current Organism:

Vibrio tasmaniensis

NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VS_2112	VS_2113	VS_2112	VS_2113	Ferrichrome transport ATP-binding protein fhuC.	ABC-type hydroxamate-dependent iron transport system, periplasmic component.	0.982
VS_2112	VS_2114	VS_2112	VS_2114	Ferrichrome transport ATP-binding protein fhuC.	Iron transport system; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.985
VS_2112	VS_II0285	VS_2112	VS_II0285	Ferrichrome transport ATP-binding protein fhuC.	Hemin transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.929
VS_2112	VS_II0286	VS_2112	VS_II0286	Ferrichrome transport ATP-binding protein fhuC.	Hemin ABC transporter, periplasmic hemin-binding protein HutB.	0.759
VS_2112	VS_II0501	VS_2112	VS_II0501	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: TonB-dependant outer membrane receptor precursor.	0.457
VS_2112	VS_II0502	VS_2112	VS_II0502	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: Substrate binding protein precursor.	0.945
VS_2112	VS_II0503	VS_2112	VS_II0503	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.959
VS_2112	VS_II1068	VS_2112	VS_II1068	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter, transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.723
VS_2112	VS_II1070	VS_2112	VS_II1070	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter, transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.756
VS_2112	VS_II1071	VS_2112	VS_II1071	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter, periplasmic susbtrate binding protein; Function of homologous gene experimentally demonstrated in another organism; transporter.	0.596
VS_2112	VS_II1124	VS_2112	VS_II1124	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.951
VS_2112	VS_II1125	VS_2112	VS_II1125	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.958
VS_2112	VS_II1126	VS_2112	VS_II1126	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: substrate-binding protein;vibrioferrin uptake; Function of homologous gene experimentally demonstrated in another organism; transporter.	0.850
VS_2112	viuD	VS_2112	VS_1124	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: Transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.935
VS_2112	viuG	VS_2112	VS_1125	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: permease protein; Function of homologous gene experimentally demonstrated in another organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.898
VS_2112	viuP	VS_2112	VS_1123	Ferrichrome transport ATP-binding protein fhuC.	ABC transporter: Substrate-binding protein precursor (BP); Function of homologous gene experimentally demonstrated in another organism; transporter.	0.654
VS_2113	VS_2112	VS_2113	VS_2112	ABC-type hydroxamate-dependent iron transport system, periplasmic component.	Ferrichrome transport ATP-binding protein fhuC.	0.982
VS_2113	VS_2114	VS_2113	VS_2114	ABC-type hydroxamate-dependent iron transport system, periplasmic component.	Iron transport system; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.990
VS_2113	VS_II0285	VS_2113	VS_II0285	ABC-type hydroxamate-dependent iron transport system, periplasmic component.	Hemin transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.814
VS_2113	VS_II0498	VS_2113	VS_II0498	ABC-type hydroxamate-dependent iron transport system, periplasmic component.	ABC transporter: ATP-binding protein.	0.950