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VS_1931 VS_1931 VS_1732 VS_1732 VS_1690 VS_1690 VS_1689 VS_1689 VS_1488 VS_1488 VS_1485 VS_1485 VS_1484 VS_1484 VS_1483 VS_1483 VS_1462 VS_1462 VS_1459 VS_1459 VS_1345 VS_1345 VS_1344 VS_1344 VS_1110 VS_1110 VS_1109 VS_1109 glgA glgA glgC glgC VS_1071 VS_1071 nqrE nqrE nqrB-2 nqrB-2 VS_0643 VS_0643 VS_0432 VS_0432 mdh mdh VS_0248 VS_0248 VS_0247 VS_0247 frdC frdC VS_0243 VS_0243 ubiE ubiE nqrB nqrB VS_II0184 VS_II0184 glgB glgB VS_II0301 VS_II0301 VS_II0366 VS_II0366 VS_II0368 VS_II0368 VS_II0454 VS_II0454 VS_II0596 VS_II0596 VS_II0597 VS_II0597 VS_II0789 VS_II0789 VS_II0790 VS_II0790 VS_II0894 VS_II0894 glgC-2 glgC-2 VS_II1422 VS_II1422 VS_II0168 VS_II0168 VS_II0167 VS_II0167 VS_II0161 VS_II0161 VS_II0157 VS_II0157 VS_II0007 VS_II0007 fumC fumC VS_2921 VS_2921 ppc ppc VS_2522 VS_2522 VS_2249 VS_2249 VS_2248 VS_2248 VS_2247 VS_2247 VS_2246 VS_2246 VS_2244 VS_2244 VS_2243 VS_2243 VS_2242 VS_2242 sucC sucC sucD sucD VS_2004 VS_2004 VS_2003 VS_2003
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VS_1931Protein nrfC homolog precursor. (228 aa)
VS_1732Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (207 aa)
VS_1690Cytochrome d ubiquinol oxidase subunit I. (528 aa)
VS_1689Cytochrome d ubiquinol oxidase subunit II. (378 aa)
VS_1488Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (553 aa)
VS_1485Formate dehydrogenase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (951 aa)
VS_1484Formate dehydrogenase iron-sulfur subunit. (202 aa)
VS_1483Formate dehydrogenase. (357 aa)
VS_1462Cytochrome c oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (324 aa)
VS_1459Cytochrome c oxidase polypeptide I homolog; Belongs to the heme-copper respiratory oxidase family. (477 aa)
VS_1345Aconitase A; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (878 aa)
VS_13442-methylcitrate synthase; Belongs to the citrate synthase family. (400 aa)
VS_1110Cytochrome d ubiquinol oxidase subunit II. (378 aa)
VS_1109Cytochrome d ubiquinol oxidase subunit I. (538 aa)
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (484 aa)
glgCGlucose-1-phosphate adenylyltransferase 1; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (405 aa)
VS_1071Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (741 aa)
nqrENa(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. (198 aa)
nqrB-2Na(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol. (414 aa)
VS_0643Conserved hypothetical protein. (142 aa)
VS_0432Ubiquinol-cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (421 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. (311 aa)
VS_0248Fumarate reductase flavoprotein subunit. (607 aa)
VS_0247Fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (254 aa)
frdCFumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (127 aa)
VS_0243Hypothetical protein. (340 aa)
ubiEUbiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (264 aa)
nqrBNa(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol. (413 aa)
VS_II0184Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (817 aa)
glgB1;4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (726 aa)
VS_II0301Hypothetical protein. (99 aa)
VS_II0366Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (553 aa)
VS_II0368Cytochrome c oxidase, subunit III. (294 aa)
VS_II0454Conserved hypothetical protein. (521 aa)
VS_II0596Periplasmic nitrate reductase, cytochrome c-type protein. (193 aa)
VS_II0597Cytochrome c-type protein; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (153 aa)
VS_II0789Putative cytochrome b561. (90 aa)
VS_II0790Putative cytochrome b561. (95 aa)
VS_II0894Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (474 aa)
glgC-2ADP-glucose pyrophosphorylase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (406 aa)
VS_II1422Conserved hypothetical protein. (211 aa)
VS_II0168Putative pullulanase precursor; Belongs to the glycosyl hydrolase 13 family. (1237 aa)
VS_II0167Glycosidase. (588 aa)
VS_II0161Glycogen debranching enzyme. (955 aa)
VS_II0157Type II secretory pathway, pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family. (657 aa)
VS_II0007Predicted periplasmic protein. (222 aa)
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (461 aa)
VS_2921Aspartate ammonia-lyase. (483 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (876 aa)
VS_2522Aconitate hydratase 2 (Citrate hydro-lyase 2); Belongs to the aconitase/IPM isomerase family. (871 aa)
VS_2249Citrate synthase; Belongs to the citrate synthase family. (429 aa)
VS_2248Succinate dehydrogenase cytochrome. (130 aa)
VS_2247Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
VS_2246Putative succinate dehydrogenase, flavoprotein subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (552 aa)
VS_2244Succinate dehydrogenase; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (239 aa)
VS_22432-oxoglutarate dehydrogenase E1 component. (939 aa)
VS_2242Dihydrolipoyllysine-residue succinyltransferase (component of 2-oxoglutaratedehydrogenase complex); E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (401 aa)
sucCSuccinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
sucDSuccinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
VS_2004Cytochrome c-type protein TorC; Belongs to the TorC/TorY family. (393 aa)
VS_2003Putative trimethylamine-N-oxide reductase. (820 aa)
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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