STRINGSTRING
VS_II0274 VS_II0274 VS_II0412 VS_II0412 VS_II0345 VS_II0345 VS_II0564 VS_II0564 cysJ cysJ nqrF nqrF viuB viuB VS_3067 VS_3067 VS_II0152 VS_II0152
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VS_II0274Flavodoxin reductase family 1 protein. (618 aa)
VS_II0412Siderophore-interacting protein ViuB. (260 aa)
VS_II0345Putative ferredoxin oxidoreductase protein. (359 aa)
VS_II0564Flavohemoprotein (Hemoglobin-like protein); Belongs to the globin family. (398 aa)
cysJSulfite reductase [NADPH] flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family. (628 aa)
nqrFNa(+)-translocating NADH-quinone reductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway. (408 aa)
viuBVibriobactin utilization protein; Function of homologous gene experimentally demonstrated in another organism; carrier. (271 aa)
VS_3067Predicted flavodoxin oxidoreductases. (237 aa)
VS_II0152Ferredoxin--NADP reductase. (282 aa)
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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