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VS_2565 VS_2565 VS_II0895 VS_II0895 atpB-2 atpB-2 atpE-2 atpE-2 atpF-2 atpF-2 atpH2 atpH2 atpA-2 atpA-2 atpG-2 atpG-2 atpD-2 atpD-2 atpC-2 atpC-2 VS_II1252 VS_II1252 VS_II1485 VS_II1485 VS_II1486 VS_II1486 VS_1465 VS_1465 VS_1462 VS_1462 VS_1461 VS_1461 VS_1460 VS_1460 VS_1459 VS_1459 VS_1110 VS_1110 VS_1109 VS_1109 ppk ppk VS_0576 VS_0576 VS_0433 VS_0433 VS_0432 VS_0432 VS_0431 VS_0431 VS_0248 VS_0248 VS_0247 VS_0247 frdC frdC frdD frdD VS_0067 VS_0067 VS_1690 VS_1690 VS_2001 VS_2001 VS_2072 VS_2072 VS_2244 VS_2244 VS_2246 VS_2246 VS_2247 VS_2247 VS_2248 VS_2248 rbfA rbfA atpC atpC atpD atpD atpG atpG atpA atpA atpH1 atpH1 atpF atpF atpE atpE atpB atpB VS_II0104 VS_II0104 VS_II0365 VS_II0365 VS_II0366 VS_II0366 VS_II0367 VS_II0367 VS_II0368 VS_II0368 VS_II0371 VS_II0371 cyoE cyoE VS_II0658 VS_II0658 VS_1689 VS_1689 VS_II0894 VS_II0894
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VS_2565Putative protease. (952 aa)
VS_II0895Cbb3-type cytochrome oxidase, cytochrome c subunit. (204 aa)
atpB-2ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (256 aa)
atpE-2ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (78 aa)
atpF-2ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa)
atpH2ATP synthase subunit D; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (183 aa)
atpA-2ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (513 aa)
atpG-2ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (289 aa)
atpD-2ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (461 aa)
atpC-2Conserved hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. (147 aa)
VS_II1252Putative membrane protein. (383 aa)
VS_II1485Zn-dependent protease; Belongs to the peptidase M16 family. (926 aa)
VS_II1486Zinc protease; Belongs to the peptidase M16 family. (920 aa)
VS_1465FixS-related protein. (78 aa)
VS_1462Cytochrome c oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (324 aa)
VS_1461Cytochrome c oxidase, subunit CcoQ. (58 aa)
VS_1460Cytochrome c oxidase, subunit CcoO. (206 aa)
VS_1459Cytochrome c oxidase polypeptide I homolog; Belongs to the heme-copper respiratory oxidase family. (477 aa)
VS_1110Cytochrome d ubiquinol oxidase subunit II. (378 aa)
VS_1109Cytochrome d ubiquinol oxidase subunit I. (538 aa)
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (698 aa)
VS_0576Ferredoxin. (84 aa)
VS_0433Ubiquinol-cytochrome c reductase,cytochrome c1. (245 aa)
VS_0432Ubiquinol-cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (421 aa)
VS_0431Ubiquinol-cytochrome c reductase,iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (196 aa)
VS_0248Fumarate reductase flavoprotein subunit. (607 aa)
VS_0247Fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (254 aa)
frdCFumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (127 aa)
frdDFumarate reductase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (145 aa)
VS_0067Cytochrome c5. (166 aa)
VS_1690Cytochrome d ubiquinol oxidase subunit I. (528 aa)
VS_2001Manganese-dependent inorganic pyrophosphatase. (301 aa)
VS_2072NADH dehydrogenase. (429 aa)
VS_2244Succinate dehydrogenase; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (239 aa)
VS_2246Putative succinate dehydrogenase, flavoprotein subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (552 aa)
VS_2247Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
VS_2248Succinate dehydrogenase cytochrome. (130 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (137 aa)
atpCATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. (140 aa)
atpDATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (467 aa)
atpGATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (288 aa)
atpAATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (523 aa)
atpH1ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (177 aa)
atpFATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa)
atpEATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (85 aa)
atpBATP synthase a chain (ATPase protein 6); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (265 aa)
VS_II0104Putative plasmid-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (263 aa)
VS_II0365Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (419 aa)
VS_II0366Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (553 aa)
VS_II0367Putative cytochrome c oxidase assembly transmembrane protein. (224 aa)
VS_II0368Cytochrome c oxidase, subunit III. (294 aa)
VS_II0371Putative cytochrome c oxidase assembly protein. (340 aa)
cyoEProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (324 aa)
VS_II0658Arsenite-oxidase small subunit. (194 aa)
VS_1689Cytochrome d ubiquinol oxidase subunit II. (378 aa)
VS_II0894Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (474 aa)
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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