STRINGSTRING
VS_II1517 VS_II1517 VS_0106 VS_0106 VS_0121 VS_0121 argA argA VS_1421 VS_1421 VS_1588 VS_1588 VS_2193 VS_2193 glsA glsA arcA arcA arcB arcB argD argD argH argH argG argG argB argB argC argC argE argE arcA-2 arcA-2 VS_2925 VS_2925 arcB-2 arcB-2 VS_2981 VS_2981 VS_II0548 VS_II0548 VS_II0715 VS_II0715 VS_II0754 VS_II0754 VS_II0884 VS_II0884
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VS_II1517Carbamate kinase; Belongs to the carbamate kinase family. (309 aa)
VS_0106Hypothetical protein. (146 aa)
VS_0121Glutamine synthetase. (469 aa)
argAAmino-acid acetyltransferase. (445 aa)
VS_1421NAD-specific glutamate dehydrogenase. (1613 aa)
VS_1588Putative acetyltransferase. (144 aa)
VS_2193Probable aminotransferase yfbQ. (410 aa)
glsAGlutaminase; Belongs to the glutaminase family. (306 aa)
arcAArginine deiminase. (406 aa)
arcBOrnithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (334 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (403 aa)
argHBifunctional protein argH; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily. (624 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (422 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (262 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (334 aa)
argEAcetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily. (378 aa)
arcA-2Arginine deiminase. (407 aa)
VS_2925Putative carbamate kinase; Belongs to the carbamate kinase family. (303 aa)
arcB-2Putative ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (336 aa)
VS_2981Predicted acyltransferase. (143 aa)
VS_II0548Conserved hypothetical protein. (84 aa)
VS_II0715Aromatic-amino-acid aminotransferase. (397 aa)
VS_II0754Allophanate hydrolase subunit 1. (254 aa)
VS_II0884Putative acetyltransferase. (155 aa)
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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