10 items (Entamoeba histolytica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	117.t00038	3' exoribonuclease family protein. (227 aa)
	91.t00009	Exosome complex exonuclease, putative. (265 aa)
	131.t00001	DEAD/DEAH box helicase, putative. (977 aa)
	201.t00018	Exosome component 10, putative. (517 aa)
	203.t00019	Uncharacterized protein. (233 aa)
	75.t00036	3' exoribonuclease family protein. (265 aa)
	144.t00006	3' exoribonuclease family protein. (238 aa)
	256.t00005	Uncharacterized protein. (478 aa)
	256.t00007	Exosome complex exonuclease RRP4, putative. (263 aa)
	180.t00014	3' exoribonuclease family protein. (223 aa)

Your Current Organism:

Entamoeba histolytica

NCBI taxonomy Id: 5759
Other names: E. histolytica

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
117.t00038	131.t00001	C4LW17	C4M010	3' exoribonuclease family protein.	DEAD/DEAH box helicase, putative.	0.988
117.t00038	144.t00006	C4LW17	C4M2G1	3' exoribonuclease family protein.	3' exoribonuclease family protein.	0.822
117.t00038	180.t00014	C4LW17	C4M8Y9	3' exoribonuclease family protein.	3' exoribonuclease family protein.	0.996
117.t00038	201.t00018	C4LW17	C4M054	3' exoribonuclease family protein.	Exosome component 10, putative.	0.969
117.t00038	203.t00019	C4LW17	C4M073	3' exoribonuclease family protein.	Uncharacterized protein.	0.996
117.t00038	256.t00005	C4LW17	C4M3S8	3' exoribonuclease family protein.	Uncharacterized protein.	0.967
117.t00038	256.t00007	C4LW17	C4M3T2	3' exoribonuclease family protein.	Exosome complex exonuclease RRP4, putative.	0.996
117.t00038	75.t00036	C4LW17	C4M182	3' exoribonuclease family protein.	3' exoribonuclease family protein.	0.997
117.t00038	91.t00009	C4LW17	C4LZA9	3' exoribonuclease family protein.	Exosome complex exonuclease, putative.	0.996
131.t00001	117.t00038	C4M010	C4LW17	DEAD/DEAH box helicase, putative.	3' exoribonuclease family protein.	0.988
131.t00001	144.t00006	C4M010	C4M2G1	DEAD/DEAH box helicase, putative.	3' exoribonuclease family protein.	0.988
131.t00001	180.t00014	C4M010	C4M8Y9	DEAD/DEAH box helicase, putative.	3' exoribonuclease family protein.	0.999
131.t00001	201.t00018	C4M010	C4M054	DEAD/DEAH box helicase, putative.	Exosome component 10, putative.	0.993
131.t00001	203.t00019	C4M010	C4M073	DEAD/DEAH box helicase, putative.	Uncharacterized protein.	0.996
131.t00001	256.t00005	C4M010	C4M3S8	DEAD/DEAH box helicase, putative.	Uncharacterized protein.	0.966
131.t00001	256.t00007	C4M010	C4M3T2	DEAD/DEAH box helicase, putative.	Exosome complex exonuclease RRP4, putative.	0.999
131.t00001	75.t00036	C4M010	C4M182	DEAD/DEAH box helicase, putative.	3' exoribonuclease family protein.	0.998
131.t00001	91.t00009	C4M010	C4LZA9	DEAD/DEAH box helicase, putative.	Exosome complex exonuclease, putative.	0.999
144.t00006	117.t00038	C4M2G1	C4LW17	3' exoribonuclease family protein.	3' exoribonuclease family protein.	0.822
144.t00006	131.t00001	C4M2G1	C4M010	3' exoribonuclease family protein.	DEAD/DEAH box helicase, putative.	0.988