(8 nodes) COPII-coated vesicle cargo loading network (Entamoeba histolytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	111.t00020	Sec24 protein, putative. (618 aa)
	178.t00014	Sec24 protein, putative. (655 aa)
	17.t00038	EhSec24E. (562 aa)
	698.t00002	Protein transport protein Sec24, putative. (876 aa)
	1.t00002	SEC-24 protein, putative. (647 aa)
	315.t00007	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (726 aa)
	98.t00012	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (721 aa)
	118.t00015	WD domain containing protein. (998 aa)

Your Current Organism:

Entamoeba histolytica

NCBI taxonomy Id: 5759
Other names: E. histolytica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
1.t00002	111.t00020	Q1EQ47	Q1EQ48	SEC-24 protein, putative.	Sec24 protein, putative.	0.615
1.t00002	118.t00015	Q1EQ47	Q1EQ51	SEC-24 protein, putative.	WD domain containing protein.	0.987
1.t00002	17.t00038	Q1EQ47	Q1EQ44	SEC-24 protein, putative.	EhSec24E.	0.927
1.t00002	178.t00014	Q1EQ47	C4M0D2	SEC-24 protein, putative.	Sec24 protein, putative.	0.926
1.t00002	315.t00007	Q1EQ47	Q1EQ49	SEC-24 protein, putative.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.949
1.t00002	698.t00002	Q1EQ47	Q1EQ46	SEC-24 protein, putative.	Protein transport protein Sec24, putative.	0.927
1.t00002	98.t00012	Q1EQ47	Q1EQ50	SEC-24 protein, putative.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.948
111.t00020	1.t00002	Q1EQ48	Q1EQ47	Sec24 protein, putative.	SEC-24 protein, putative.	0.615
111.t00020	118.t00015	Q1EQ48	Q1EQ51	Sec24 protein, putative.	WD domain containing protein.	0.987
111.t00020	17.t00038	Q1EQ48	Q1EQ44	Sec24 protein, putative.	EhSec24E.	0.927
111.t00020	178.t00014	Q1EQ48	C4M0D2	Sec24 protein, putative.	Sec24 protein, putative.	0.927
111.t00020	315.t00007	Q1EQ48	Q1EQ49	Sec24 protein, putative.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.947
111.t00020	698.t00002	Q1EQ48	Q1EQ46	Sec24 protein, putative.	Protein transport protein Sec24, putative.	0.926
111.t00020	98.t00012	Q1EQ48	Q1EQ50	Sec24 protein, putative.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.947
118.t00015	1.t00002	Q1EQ51	Q1EQ47	WD domain containing protein.	SEC-24 protein, putative.	0.987
118.t00015	111.t00020	Q1EQ51	Q1EQ48	WD domain containing protein.	Sec24 protein, putative.	0.987
118.t00015	17.t00038	Q1EQ51	Q1EQ44	WD domain containing protein.	EhSec24E.	0.933
118.t00015	178.t00014	Q1EQ51	C4M0D2	WD domain containing protein.	Sec24 protein, putative.	0.932
118.t00015	315.t00007	Q1EQ51	Q1EQ49	WD domain containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.995
118.t00015	698.t00002	Q1EQ51	Q1EQ46	WD domain containing protein.	Protein transport protein Sec24, putative.	0.985